Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RNU6-741P-201ENST00000383889 107 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 RPS7P13-201ENST00000413955 498 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 OR2AS1P-201ENST00000427827 319 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AL445567.1-201ENST00000439121 144 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 TRIM60P18-201ENST00000441518 828 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 MTND2P22-201ENST00000444325 1033 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 RPL7P36-201ENST00000444633 681 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 RPL30P6-201ENST00000475925 342 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 CDC42P4-201ENST00000510507 563 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 RNU6-1282P-201ENST00000516735 96 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 RNA5SP291-201ENST00000517222 105 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 AP002748.2-201ENST00000528671 348 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC068790.3-201ENST00000602988 553 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 Z99497.2-201ENST00000603634 310 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC112187.2-201ENST00000604345 283 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 BCRP9-201ENST00000605312 388 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 AC007494.3-201ENST00000624660 743 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL138827.1-201ENST00000402666 306 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 Z98941.1-201ENST00000407764 100 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 RN7SKP140-201ENST00000411196 284 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 Z85995.1-201ENST00000415547 335 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL139413.1-201ENST00000421309 217 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC012498.1-201ENST00000424037 437 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 UBE2D3P4-201ENST00000441973 436 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 MTCO3P45-201ENST00000443036 613 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC092798.1-201ENST00000458542 409 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 RNU7-59P-201ENST00000459101 61 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC008481.1-201ENST00000463278 396 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC006483.1-201ENST00000487308 313 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 RNU6-928P-201ENST00000516876 104 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 NRON-201ENST00000517270 370 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AP000857.1-201ENST00000532151 543 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL133153.1-201ENST00000557756 303 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AMZ2P1-203ENST00000565833 850 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC109446.2-201ENST00000567872 497 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC002545.1-201ENST00000592511 181 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 NUTF2P8-201ENST00000604593 363 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC121247.2-201ENST00000604776 136 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC091965.4-201ENST00000607691 587 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC007038.2-201ENST00000608095 740 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC092628.2-201ENST00000622492 339 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AL356266.1-201ENST00000623311 483 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC073308.1-201ENST00000623696 305 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC092192.1-201ENST00000633154 1018 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 MIR3974-201ENST00000637126 96 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFRSF4P43489 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 AC006378.2-201ENST00000623178 2476 ntBASIC2.86□□□□□ -1.95
TNFRSF4P43489 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFRSF4P43489 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TNFRSF4P43489 SRP72P2-201ENST00000344851 1979 ntBASIC2.85□□□□□ -1.95
TNFRSF4P43489 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
TNFRSF4P43489 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFRSF4P43489 AC022336.2-201ENST00000568966 2538 ntBASIC2.85□□□□□ -1.95
TNFRSF4P43489 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TNFRSF4P43489 CCT4P2-201ENST00000233836 1548 ntBASIC2.85□□□□□ -1.95
TNFRSF4P43489 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TNFRSF4P43489 SNORD116-2-201ENST00000384274 95 ntBASIC2.85□□□□□ -1.95
TNFRSF4P43489 RNU6-1035P-201ENST00000384477 107 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms