Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRBP28702 PSMA6P4-201ENST00000603247 718 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL160290.3-201ENST00000604869 165 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC133104.2-201ENST00000615272 193 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AP001486.3-201ENST00000615334 372 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC011155.2-201ENST00000623202 216 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AL732372.2-225ENST00000642124 456 ntBASIC5.36□□□□□ -1.55
RXRBP28702 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RXRBP28702 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.36□□□□□ -1.55
RXRBP28702 CDC27P3-201ENST00000635418 1910 ntBASIC5.36□□□□□ -1.55
RXRBP28702 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RXRBP28702 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRBP28702 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.35□□□□□ -1.55
RXRBP28702 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRBP28702 AC011460.1-201ENST00000636268 1834 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC097714.1-201ENST00000511272 1647 ntBASIC5.35□□□□□ -1.55
RXRBP28702 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RXRBP28702 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RXRBP28702 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRBP28702 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRBP28702 Y_RNA.80-201ENST00000362996 102 ntBASIC5.35□□□□□ -1.55
RXRBP28702 RNU6-511P-201ENST00000363496 107 ntBASIC5.35□□□□□ -1.55
RXRBP28702 SNORA38.1-201ENST00000364172 131 ntBASIC5.35□□□□□ -1.55
RXRBP28702 SNORD116-11-201ENST00000383882 92 ntBASIC5.35□□□□□ -1.55
RXRBP28702 Y_RNA.556-201ENST00000384677 113 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AL360182.1-201ENST00000397433 468 ntBASIC5.35□□□□□ -1.55
RXRBP28702 RAC1P6-201ENST00000423911 575 ntBASIC5.35□□□□□ -1.55
RXRBP28702 RPL23AP25-201ENST00000430973 463 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC092013.1-201ENST00000438795 332 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC108734.1-201ENST00000439549 399 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AL031584.1-201ENST00000447169 754 ntBASIC5.35□□□□□ -1.55
RXRBP28702 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.35□□□□□ -1.55
RXRBP28702 GSTA11P-201ENST00000452866 669 ntBASIC5.35□□□□□ -1.55
RXRBP28702 HMGB1P15-201ENST00000453854 435 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AL591473.1-201ENST00000464297 313 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 RN7SKP40-201ENST00000517211 242 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AP000763.2-201ENST00000540641 163 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC007458.1-201ENST00000542812 373 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRBP28702 AC138761.3-201ENST00000579993 334 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC062037.2-201ENST00000610137 73 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC006157.1-201ENST00000611750 366 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC004696.1-201ENST00000614345 607 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC123768.4-201ENST00000616244 701 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC078938.1-201ENST00000620993 318 ntBASIC5.35□□□□□ -1.55
RXRBP28702 AC091905.2-201ENST00000623143 306 ntBASIC5.35□□□□□ -1.55
RXRBP28702 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.35□□□□□ -1.55
RXRBP28702 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RXRBP28702 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRBP28702 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RXRBP28702 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.35□□□□□ -1.55
RXRBP28702 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRBP28702 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.34□□□□□ -1.55
RXRBP28702 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRBP28702 AC009902.3-201ENST00000606235 2172 ntBASIC5.34□□□□□ -1.55
RXRBP28702 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 RNA5SP50-201ENST00000363731 107 ntBASIC5.34□□□□□ -1.55
RXRBP28702 U3.11-201ENST00000364476 212 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RNA5SP97-201ENST00000365006 84 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RNA5SP126-201ENST00000365092 109 ntBASIC5.34□□□□□ -1.55
RXRBP28702 SNORA75B-201ENST00000384053 137 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RNU6-209P-201ENST00000384118 107 ntBASIC5.34□□□□□ -1.55
RXRBP28702 U3.20-201ENST00000390909 217 ntBASIC5.34□□□□□ -1.55
RXRBP28702 UBA52P6-201ENST00000399822 382 ntBASIC5.34□□□□□ -1.55
RXRBP28702 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 AC007738.1-201ENST00000413892 348 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RPL31P45-201ENST00000419532 356 ntBASIC5.34□□□□□ -1.55
RXRBP28702 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRBP28702 OR2AS1P-201ENST00000427827 319 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RPL36P19-201ENST00000430744 301 ntBASIC5.34□□□□□ -1.55
RXRBP28702 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.55
RXRBP28702 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.34□□□□□ -1.55
RXRBP28702 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.34□□□□□ -1.55
RXRBP28702 SNRPFP3-201ENST00000457792 225 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RPL5P30-201ENST00000465511 891 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RPL21P93-201ENST00000480465 489 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AC090686.1-201ENST00000481577 749 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AC015911.1-201ENST00000495111 156 ntBASIC5.34□□□□□ -1.55
RXRBP28702 RNA5SP503-201ENST00000517047 117 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AC091516.1-201ENST00000549191 703 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.34□□□□□ -1.55
RXRBP28702 MIR5684-201ENST00000585074 65 ntBASIC5.34□□□□□ -1.55
RXRBP28702 BNIP3P16-201ENST00000589779 534 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.34□□□□□ -1.55
RXRBP28702 AL008729.2-201ENST00000606393 473 ntBASIC5.34□□□□□ -1.55
RXRBP28702 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRBP28702 AP001005.3-201ENST00000622049 129 ntBASIC5.34□□□□□ -1.55
RXRBP28702 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRBP28702 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 BDP1P-201ENST00000582658 1990 ntBASIC5.34□□□□□ -1.55
RXRBP28702 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.34□□□□□ -1.55
RXRBP28702 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRBP28702 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms