Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP003467.2-201ENST00000520175 319 ntBASIC2.14□□□□□ -2.07
CD74P04233 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.14□□□□□ -2.07
CD74P04233 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.14□□□□□ -2.07
CD74P04233 MYL12BP1-201ENST00000569826 507 ntBASIC2.14□□□□□ -2.07
CD74P04233 MIR4513-201ENST00000581077 86 ntBASIC2.14□□□□□ -2.07
CD74P04233 MIR4658-201ENST00000584344 65 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 BNIP3P40-201ENST00000596017 556 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC245884.10-201ENST00000597355 337 ntBASIC2.14□□□□□ -2.07
CD74P04233 AL450336.1-201ENST00000605180 586 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC097478.2-201ENST00000610572 514 ntBASIC2.14□□□□□ -2.07
CD74P04233 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC079597.1-201ENST00000624306 508 ntBASIC2.14□□□□□ -2.07
CD74P04233 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.14□□□□□ -2.07
CD74P04233 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CD74P04233 AC005832.2-201ENST00000538921 1430 ntBASIC2.14□□□□□ -2.07
CD74P04233 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CD74P04233 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CD74P04233 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.13□□□□□ -2.07
CD74P04233 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.13□□□□□ -2.07
CD74P04233 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD74P04233 RNU6-461P-201ENST00000364195 107 ntBASIC2.13□□□□□ -2.07
CD74P04233 RNU6-744P-201ENST00000365557 107 ntBASIC2.13□□□□□ -2.07
CD74P04233 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CD74P04233 RNU6-76P-201ENST00000384060 104 ntBASIC2.13□□□□□ -2.07
CD74P04233 RNU6-1316P-201ENST00000384242 108 ntBASIC2.13□□□□□ -2.07
CD74P04233 MIR524-201ENST00000385242 87 ntBASIC2.13□□□□□ -2.07
CD74P04233 RNU6-757P-201ENST00000410334 100 ntBASIC2.13□□□□□ -2.07
CD74P04233 AF274854.1-201ENST00000413236 615 ntBASIC2.13□□□□□ -2.07
CD74P04233 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.13□□□□□ -2.07
CD74P04233 SPA17P1-201ENST00000416656 452 ntBASIC2.13□□□□□ -2.07
CD74P04233 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
CD74P04233 ELOCP9-201ENST00000418624 239 ntBASIC2.13□□□□□ -2.07
CD74P04233 MTCO2P17-201ENST00000424336 677 ntBASIC2.13□□□□□ -2.07
CD74P04233 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.13□□□□□ -2.07
CD74P04233 AC236972.1-201ENST00000433225 199 ntBASIC2.13□□□□□ -2.07
CD74P04233 TAAR7P-201ENST00000436141 242 ntBASIC2.13□□□□□ -2.07
CD74P04233 SNRPEP7-201ENST00000438350 220 ntBASIC2.13□□□□□ -2.07
CD74P04233 AL117351.1-201ENST00000438864 766 ntBASIC2.13□□□□□ -2.07
CD74P04233 PAXBP1P1-201ENST00000449315 447 ntBASIC2.13□□□□□ -2.07
CD74P04233 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.13□□□□□ -2.07
CD74P04233 AC090096.1-201ENST00000489168 390 ntBASIC2.13□□□□□ -2.07
CD74P04233 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
CD74P04233 AC024589.1-201ENST00000512207 263 ntBASIC2.13□□□□□ -2.07
CD74P04233 SNORA31.22-201ENST00000517204 135 ntBASIC2.13□□□□□ -2.07
CD74P04233 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 GLYCAM1-201ENST00000546596 285 ntBASIC2.13□□□□□ -2.07
CD74P04233 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 AC090888.1-201ENST00000561335 1141 ntBASIC2.13□□□□□ -2.07
CD74P04233 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.13□□□□□ -2.07
CD74P04233 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
CD74P04233 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.13□□□□□ -2.07
CD74P04233 AC144521.1-201ENST00000607148 956 ntBASIC2.13□□□□□ -2.07
CD74P04233 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.13□□□□□ -2.07
CD74P04233 AC007349.4-201ENST00000608114 532 ntBASIC2.13□□□□□ -2.07
CD74P04233 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.13□□□□□ -2.07
CD74P04233 MIR6895-201ENST00000613497 78 ntBASIC2.13□□□□□ -2.07
CD74P04233 ATP5A1P2-202ENST00000616464 443 ntBASIC2.13□□□□□ -2.07
CD74P04233 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
CD74P04233 OR5H6-203ENST00000642105 978 ntBASIC2.13□□□□□ -2.07
CD74P04233 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CD74P04233 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CD74P04233 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CD74P04233 OR4G2P-202ENST00000641004 1759 ntBASIC2.13□□□□□ -2.07
CD74P04233 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CD74P04233 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
CD74P04233 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
CD74P04233 SNORA4.1-201ENST00000364263 144 ntBASIC2.12□□□□□ -2.07
CD74P04233 RNU6-1078P-201ENST00000364522 103 ntBASIC2.12□□□□□ -2.07
CD74P04233 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CD74P04233 SNORA18.3-201ENST00000384122 132 ntBASIC2.12□□□□□ -2.07
CD74P04233 RNU6-114P-201ENST00000384704 105 ntBASIC2.12□□□□□ -2.07
CD74P04233 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
CD74P04233 MIR320C1-201ENST00000408566 88 ntBASIC2.12□□□□□ -2.07
CD74P04233 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CD74P04233 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
CD74P04233 NDUFB4P7-201ENST00000423198 363 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC084290.1-201ENST00000434995 374 ntBASIC2.12□□□□□ -2.07
CD74P04233 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.12□□□□□ -2.07
CD74P04233 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.12□□□□□ -2.07
CD74P04233 MTND2P24-201ENST00000453434 806 ntBASIC2.12□□□□□ -2.07
CD74P04233 SNORD121B-201ENST00000458838 81 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC104563.1-201ENST00000476147 376 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.12□□□□□ -2.07
CD74P04233 AC021382.1-201ENST00000483523 359 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC104090.1-201ENST00000506341 1171 ntBASIC2.12□□□□□ -2.07
CD74P04233 HIGD1AP13-201ENST00000509878 289 ntBASIC2.12□□□□□ -2.07
CD74P04233 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
CD74P04233 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.12□□□□□ -2.07
CD74P04233 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.12□□□□□ -2.07
CD74P04233 AC243972.3-201ENST00000539655 198 ntBASIC2.12□□□□□ -2.07
CD74P04233 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.12□□□□□ -2.07
CD74P04233 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms