Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 UBE3AP2-201ENST00000429033 2259 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AP001486.2-201ENST00000561652 5113 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4BO75351 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 SNORD35B-201ENST00000363660 87 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 RNA5SP130-201ENST00000364431 114 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 U3.12-201ENST00000364498 214 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 PDCL2P1-201ENST00000419302 352 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 MTCO1P39-201ENST00000426148 480 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 MTATP6P4-201ENST00000427725 675 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 CYCSP43-201ENST00000438233 310 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC006011.1-201ENST00000442758 349 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4BO75351 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4BO75351 AL133547.1-201ENST00000448546 220 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 RPS11P1-201ENST00000451072 473 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4BO75351 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
VPS4BO75351 FGF7P4-201ENST00000509595 295 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 FTH1P9-201ENST00000513251 355 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 RNA5SP503-201ENST00000517047 117 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 AC078814.3-201ENST00000553036 491 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 RN7SL600P-201ENST00000581811 299 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4BO75351 AF038458.1-201ENST00000588406 262 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC005255.1-201ENST00000593748 216 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 AL606490.9-201ENST00000603331 271 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
VPS4BO75351 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4BO75351 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VPS4BO75351 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VPS4BO75351 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4BO75351 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS4BO75351 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4BO75351 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4BO75351 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 RNU6-335P-201ENST00000364563 113 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 Y_RNA.576-201ENST00000384781 102 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL162578.1-201ENST00000406202 378 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 TXNP7-201ENST00000406296 293 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 RNU6-1148P-201ENST00000410992 104 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 ERLEC1P1-201ENST00000433806 578 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4BO75351 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.92□□□□□ -1.78
VPS4BO75351 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 AL162395.1-201ENST00000457882 422 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC106872.2-201ENST00000494303 480 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 AC026726.1-201ENST00000512859 601 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC099522.1-202ENST00000514718 367 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 RNU6-685P-201ENST00000517088 95 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 AP006587.4-201ENST00000526053 529 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS4BO75351 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 OR4H12P-201ENST00000556269 907 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 MIR5685-201ENST00000579080 79 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS4BO75351 AC174048.1-201ENST00000603389 144 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL022099.1-201ENST00000604551 712 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL161756.2-201ENST00000604597 246 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL160281.1-201ENST00000605307 311 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC021646.1-201ENST00000605469 484 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AL591424.2-201ENST00000617023 128 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
VPS4BO75351 AL136221.1-201ENST00000621449 509 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 AC090617.10-201ENST00000624308 134 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VPS4BO75351 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 AC092326.2-201ENST00000624772 1561 ntBASIC3.92□□□□□ -1.78
VPS4BO75351 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4BO75351 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4BO75351 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS4BO75351 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS4BO75351 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS4BO75351 Y_RNA.142-201ENST00000363491 102 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 RNU6-522P-201ENST00000364497 107 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS4BO75351 RNU6-946P-201ENST00000383878 107 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 RNU6-1074P-201ENST00000383995 104 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 Y_RNA.509-201ENST00000384506 99 ntBASIC3.91□□□□□ -1.78
VPS4BO75351 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms