Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
TO15178 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.16□□□□□ -1.9
TO15178 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.16□□□□□ -1.9
TO15178 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.16□□□□□ -1.9
TO15178 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.16□□□□□ -1.9
TO15178 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
TO15178 AL139286.2-201ENST00000606838 396 ntBASIC3.16□□□□□ -1.9
TO15178 AL589743.7-201ENST00000612637 233 ntBASIC3.16□□□□□ -1.9
TO15178 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 MIR6075-201ENST00000620782 95 ntBASIC3.16□□□□□ -1.9
TO15178 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.16□□□□□ -1.9
TO15178 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
TO15178 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
TO15178 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
TO15178 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TO15178 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.9
TO15178 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
TO15178 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
TO15178 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.15□□□□□ -1.9
TO15178 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TO15178 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
TO15178 AL513302.2-201ENST00000562313 1842 ntBASIC3.15□□□□□ -1.91
TO15178 AC233263.6-201ENST00000631132 1963 ntBASIC3.15□□□□□ -1.91
TO15178 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TO15178 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TO15178 RNU6-799P-201ENST00000363567 107 ntBASIC3.15□□□□□ -1.91
TO15178 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.15□□□□□ -1.91
TO15178 RNU6-1197P-201ENST00000391183 107 ntBASIC3.15□□□□□ -1.91
TO15178 RPS3AP36-201ENST00000398190 775 ntBASIC3.15□□□□□ -1.91
TO15178 RNU2-16P-201ENST00000410712 136 ntBASIC3.15□□□□□ -1.91
TO15178 RNU6-195P-201ENST00000411352 109 ntBASIC3.15□□□□□ -1.91
TO15178 AL513331.1-201ENST00000411908 397 ntBASIC3.15□□□□□ -1.91
TO15178 BX295541.1-201ENST00000417774 250 ntBASIC3.15□□□□□ -1.91
TO15178 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.15□□□□□ -1.91
TO15178 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.15□□□□□ -1.91
TO15178 PIGFP2-201ENST00000421400 651 ntBASIC3.15□□□□□ -1.91
TO15178 AC069157.1-201ENST00000421749 137 ntBASIC3.15□□□□□ -1.91
TO15178 AC007283.2-201ENST00000424739 197 ntBASIC3.15□□□□□ -1.91
TO15178 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
TO15178 AC020550.1-201ENST00000447385 163 ntBASIC3.15□□□□□ -1.91
TO15178 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.15□□□□□ -1.91
TO15178 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.15□□□□□ -1.91
TO15178 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
TO15178 RN7SL293P-201ENST00000481765 281 ntBASIC3.15□□□□□ -1.91
TO15178 AC093663.1-201ENST00000497190 394 ntBASIC3.15□□□□□ -1.91
TO15178 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
TO15178 RNU6-1256P-201ENST00000516539 103 ntBASIC3.15□□□□□ -1.91
TO15178 RNU6-405P-201ENST00000516637 110 ntBASIC3.15□□□□□ -1.91
TO15178 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
TO15178 AC007458.1-201ENST00000542812 373 ntBASIC3.15□□□□□ -1.91
TO15178 AC087883.1-201ENST00000551882 391 ntBASIC3.15□□□□□ -1.91
TO15178 TGIF1P1-201ENST00000558095 802 ntBASIC3.15□□□□□ -1.91
TO15178 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.15□□□□□ -1.91
TO15178 MIR3913-1-201ENST00000577744 102 ntBASIC3.15□□□□□ -1.91
TO15178 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.15□□□□□ -1.91
TO15178 MIR4429-201ENST00000580105 73 ntBASIC3.15□□□□□ -1.91
TO15178 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.15□□□□□ -1.91
TO15178 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.15□□□□□ -1.91
TO15178 AC073648.5-201ENST00000603502 305 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.6-201ENST00000603753 252 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.11-201ENST00000604059 253 ntBASIC3.15□□□□□ -1.91
TO15178 AC008162.1-201ENST00000604718 254 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.1-201ENST00000604752 252 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.5-201ENST00000605253 252 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.12-201ENST00000605291 253 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.8-201ENST00000605353 252 ntBASIC3.15□□□□□ -1.91
TO15178 AL670379.7-201ENST00000605823 252 ntBASIC3.15□□□□□ -1.91
TO15178 AC091834.1-201ENST00000614543 472 ntBASIC3.15□□□□□ -1.91
TO15178 AC090132.2-201ENST00000615881 347 ntBASIC3.15□□□□□ -1.91
TO15178 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TO15178 AL138880.2-201ENST00000616214 239 ntBASIC3.15□□□□□ -1.91
TO15178 AL355365.1-201ENST00000616480 294 ntBASIC3.15□□□□□ -1.91
TO15178 AC244100.1-202ENST00000621554 382 ntBASIC3.15□□□□□ -1.91
TO15178 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TO15178 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TO15178 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TO15178 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TO15178 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
TO15178 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.14□□□□□ -1.91
TO15178 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TO15178 HSPE1P11-201ENST00000339579 310 ntBASIC3.14□□□□□ -1.91
TO15178 SNORD56.2-201ENST00000363242 71 ntBASIC3.14□□□□□ -1.91
TO15178 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
TO15178 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
TO15178 Z99755.1-201ENST00000414048 380 ntBASIC3.14□□□□□ -1.91
TO15178 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.14□□□□□ -1.91
TO15178 RAC1P6-201ENST00000423911 575 ntBASIC3.14□□□□□ -1.91
TO15178 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.14□□□□□ -1.91
TO15178 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
TO15178 NDUFB4P6-201ENST00000436819 366 ntBASIC3.14□□□□□ -1.91
TO15178 AC008264.1-201ENST00000447612 367 ntBASIC3.14□□□□□ -1.91
TO15178 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.14□□□□□ -1.91
TO15178 RPS29P12-201ENST00000460178 152 ntBASIC3.14□□□□□ -1.91
TO15178 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.14□□□□□ -1.91
TO15178 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms