Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL670379.4-201ENST00000605279 254 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.12-201ENST00000605291 253 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.8-201ENST00000605353 252 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.9-201ENST00000605428 253 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL670379.7-201ENST00000605823 252 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC026790.2-201ENST00000606282 430 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC011374.2-201ENST00000607135 526 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC245100.7-201ENST00000609678 442 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AL354950.1-201ENST00000614150 568 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC009318.4-201ENST00000620496 486 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 AP003476.1-201ENST00000623984 516 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR219B-201ENST00000637023 88 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 MTND5P30-201ENST00000452896 1731 ntBASIC0.81□□□□□ -2.28
CHKB-CPT1BH3BT56 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC010889.1-201ENST00000566193 2666 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORD51-201ENST00000384320 80 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 HMGB1P17-201ENST00000403495 628 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 RN7SKP32-201ENST00000410167 303 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 UBE2V1P5-201ENST00000440070 405 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC068135.1-201ENST00000446164 246 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC008379.1-201ENST00000463655 464 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 S100A11P2-201ENST00000467589 312 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 LARP1BP2-201ENST00000486594 519 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 MRPS33P3-201ENST00000513456 322 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC034114.1-201ENST00000520293 285 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC106782.4-201ENST00000568264 210 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR4319-201ENST00000577285 85 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AL022067.1-201ENST00000602426 454 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 BX248123.2-201ENST00000606318 124 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR502-201ENST00000606349 86 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AC021851.1-201ENST00000608537 1082 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR8057-201ENST00000620957 69 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 AL356585.4-201ENST00000623078 1229 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 MTND4P23-201ENST00000447723 1363 ntBASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CHKB-CPT1BH3BT56 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 OR5J1P-201ENST00000313544 939 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 Z98749.2-208ENST00000381646 500 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU6-939P-201ENST00000384634 107 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR34B-201ENST00000385076 84 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU2-63P-201ENST00000410792 194 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 RSU1P2-202ENST00000437884 485 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC241584.1-201ENST00000438469 1241 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC092757.1-201ENST00000467293 467 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 OR2A41P-201ENST00000473586 105 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AL049873.1-201ENST00000480540 376 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC069528.1-202ENST00000482888 637 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 RPS15AP36-201ENST00000492022 382 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC006390.1-201ENST00000508068 283 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC023825.1-201ENST00000566704 1030 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AL451007.1-201ENST00000595491 289 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC103710.1-201ENST00000610003 901 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR6130-201ENST00000619419 109 ntBASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CHKB-CPT1BH3BT56 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AL445646.1-201ENST00000431784 216 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 SNRPGP13-201ENST00000442212 177 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 HMGN3P1-201ENST00000453847 193 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC017007.3-201ENST00000479865 435 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC113420.1-201ENST00000507903 571 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 RNA5SP445-201ENST00000515889 115 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORA4.4-201ENST00000515921 135 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 RNA5SP61-201ENST00000516453 100 ntBASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CHKB-CPT1BH3BT56 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms