Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TCRBV3S1A0A5B6 AL356473.1-201ENST00000406203 1408 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 MIR449A-201ENST00000362113 91 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 MIR126-201ENST00000362291 85 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-543P-201ENST00000362576 108 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-203P-201ENST00000384038 104 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 SNORA67.6-201ENST00000391093 99 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 RN7SKP158-201ENST00000410453 326 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-272P-201ENST00000411028 104 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC099548.1-201ENST00000421443 426 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AL513185.2-201ENST00000425543 193 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 MTND4LP10-201ENST00000435146 291 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 UBE2V1P5-201ENST00000440070 405 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC005410.1-202ENST00000460347 485 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC118273.2-201ENST00000532092 465 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 YWHAZP1-201ENST00000556286 722 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 SNORD53B-201ENST00000577887 78 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC055876.5-201ENST00000605667 259 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 AC007038.2-201ENST00000608095 740 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-1151P-201ENST00000384684 107 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 RNA5SP508-201ENST00000411327 119 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 UBE2V1P9-201ENST00000414760 368 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 PAICSP7-201ENST00000419829 962 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 Z85994.2-201ENST00000434327 452 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC007677.1-201ENST00000445757 515 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 PABPC1P3-201ENST00000469174 459 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 VPS26AP1-201ENST00000483197 979 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 RPS27P23-201ENST00000487608 251 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 RPS29P21-201ENST00000496272 170 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 MTCYBP18-201ENST00000501056 747 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 SUMO2P6-201ENST00000505273 288 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 RNU5F-8P-201ENST00000515941 111 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 HAUS1P3-201ENST00000523909 662 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AP003033.1-201ENST00000527244 415 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 OR4P1P-201ENST00000530808 1136 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC010186.2-204ENST00000537668 439 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 AC010149.2-201ENST00000637608 315 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 OR5H6-203ENST00000642105 978 ntBASIC1.23□□□□□ -2.21
TCRBV3S1A0A5B6 MTND5P31-201ENST00000419366 1374 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 RNA5SP125-201ENST00000364843 120 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 MTND5P25-201ENST00000430499 799 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 DNAJC19P4-201ENST00000440115 345 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 HMGN2P10-201ENST00000448085 265 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 RPS20P24-201ENST00000457473 361 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AC147055.4-201ENST00000504399 745 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AC015720.1-201ENST00000565251 277 ntBASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TCRBV3S1A0A5B6 RNU6-444P-201ENST00000383988 108 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 RPS7P9-201ENST00000414704 586 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 snoU109.4-201ENST00000458953 143 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 TRBV1-201ENST00000476502 284 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC027309.2-201ENST00000520566 192 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AP004247.1-201ENST00000531556 1289 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms