Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 HLA-N-201ENST00000437516 135 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RANP8-201ENST00000444720 713 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 Z75741.1-201ENST00000446793 314 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AL136380.1-201ENST00000447970 162 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RPL23AP15-201ENST00000450202 459 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RPS15AP1-201ENST00000457423 391 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RNU7-136P-201ENST00000458819 69 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RNY3P15-201ENST00000516297 97 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RNU6-445P-201ENST00000516949 107 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 APOOP3-201ENST00000536787 586 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 HSPE1P3-201ENST00000559254 309 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 AC018889.1-201ENST00000605372 397 ntBASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL17A1Q9UMD9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 MTCO1P7-201ENST00000419523 1542 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC127391.1-201ENST00000411737 98 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 GSTM3P2-201ENST00000412746 530 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 EIF4EP1-201ENST00000422311 642 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AL606489.2-201ENST00000433886 234 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 RPL23AP89-201ENST00000439324 255 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AL035666.1-201ENST00000446195 348 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC013470.1-201ENST00000453438 462 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 RPL5P30-201ENST00000465511 891 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 RPL21P13-201ENST00000488305 481 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC106872.2-201ENST00000494303 480 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 PPBPP1-201ENST00000510807 373 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 RNU6-202P-201ENST00000515998 96 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC099489.2-201ENST00000574976 260 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 SNORA62.6-201ENST00000606322 83 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AL133173.2-201ENST00000614270 90 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 AL356274.2-201ENST00000624379 3752 ntBASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL17A1Q9UMD9 CDC27P3-201ENST00000635418 1910 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC093775.1-201ENST00000624154 1868 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 Y_RNA.153-201ENST00000363615 91 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 RNU6-777P-201ENST00000364265 104 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 RNU6-657P-201ENST00000383904 107 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 MIR137-201ENST00000385223 102 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 MCFD2P1-201ENST00000417812 300 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 GNG5P5-201ENST00000420444 220 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AL451054.2-201ENST00000420896 202 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 COTL1P1-201ENST00000422309 375 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC010881.1-201ENST00000433830 235 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC023347.2-201ENST00000433994 462 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 HMGB1P12-201ENST00000438594 598 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 Y_RNA.635-201ENST00000459041 101 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AP001992.1-205ENST00000462248 379 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 Vault.3-201ENST00000516676 95 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC022882.1-201ENST00000532142 501 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 BCRP9-201ENST00000605312 388 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AC010149.2-201ENST00000637608 315 ntBASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.67□□□□□ -1.5
COL17A1Q9UMD9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.66□□□□□ -1.5
COL17A1Q9UMD9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL17A1Q9UMD9 NACAP2-201ENST00000318548 624 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms