Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC104651.1-201ENST00000427559 735 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC013267.1-201ENST00000458227 267 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 OR5G4P-201ENST00000525251 760 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 ATP5F1P5-201ENST00000526403 760 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC022690.1-201ENST00000526681 550 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 EIF1P4-201ENST00000572664 335 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AL022154.1-201ENST00000604698 785 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AL589994.2-201ENST00000621124 579 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AF117829.1-206ENST00000621883 3802 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 OR5AK4P-201ENST00000635912 903 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 MTND5P29-201ENST00000458676 1807 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 FRG1CP-201ENST00000358464 769 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 SNORD9-201ENST00000362566 104 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-1103P-201ENST00000384150 107 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RNU2-39P-201ENST00000410604 198 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 CYCSP19-201ENST00000411715 316 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC093106.2-201ENST00000428212 385 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC073464.1-201ENST00000429823 534 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RPL36AP6-201ENST00000435770 321 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 MTND1P34-201ENST00000438556 671 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RPS3AP46-201ENST00000448352 682 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 SSXP4-201ENST00000451349 245 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC087588.1-201ENST00000462203 316 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC007182.2-201ENST00000489251 402 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC023194.1-201ENST00000493084 308 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AP002812.1-201ENST00000495378 474 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC107401.1-201ENST00000503426 685 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RN7SKP60-201ENST00000516985 239 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 CASP1P1-201ENST00000526345 212 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 MIR3158-1-201ENST00000583596 81 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC007619.2-201ENST00000605743 379 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC006133.1-201ENST00000617106 264 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC002076.2-201ENST00000617362 122 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC073534.2-201ENST00000620377 381 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 SNORA50A-202ENST00000629536 136 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AC007785.2-201ENST00000598627 1916 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC6A13Q9NSD5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 Y_RNA.41-201ENST00000362646 102 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-456P-201ENST00000384493 107 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-817P-201ENST00000391083 104 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AL590704.1-201ENST00000402856 794 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 RNU2-33P-201ENST00000410344 192 ntBASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC6A13Q9NSD5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms