Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AP001429.1-201ENST00000602568 530 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AC107304.1-201ENST00000604229 296 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 OR6R2P-201ENST00000609216 300 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AC138649.3-201ENST00000622154 254 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AC068137.3-201ENST00000639191 341 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AC073869.6-201ENST00000640656 341 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 AL353743.1-202ENST00000431724 1695 ntBASIC3.16□□□□□ -1.9
SIX2Q9NPC8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX2Q9NPC8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SIX2Q9NPC8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SIX2Q9NPC8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SIX2Q9NPC8 RNU1-35P-201ENST00000362782 153 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 RNU6-1155P-201ENST00000363554 107 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 MTND3P17-201ENST00000416968 344 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL137014.1-201ENST00000420490 1226 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC244098.2-201ENST00000422068 99 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC019097.1-201ENST00000424783 735 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 OR4K11P-201ENST00000431829 904 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 ARPC3P1-201ENST00000437218 533 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC079448.1-201ENST00000449377 373 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL359385.1-201ENST00000456509 365 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 RPL7P49-201ENST00000471402 708 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 RPS3AP17-201ENST00000472594 777 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 RBM43P1-201ENST00000476891 1081 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC108078.1-201ENST00000508073 725 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 OR4T1P-201ENST00000554933 911 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL391840.1-201ENST00000571144 367 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 OR4K8P-201ENST00000578842 1048 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC245014.2-201ENST00000603689 287 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL022154.1-201ENST00000604698 785 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC246785.4-201ENST00000605374 287 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AL158211.4-201ENST00000606988 584 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 AC068880.5-201ENST00000624331 290 ntBASIC3.15□□□□□ -1.91
SIX2Q9NPC8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
SIX2Q9NPC8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNU5E-1-201ENST00000362477 120 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNU5A-8P-201ENST00000364102 114 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNY4P16-201ENST00000364768 94 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNA5SP239-201ENST00000410218 129 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 MTND1P21-201ENST00000412991 285 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC099677.1-201ENST00000420575 175 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 BEND7P1-201ENST00000422058 457 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AL358934.1-201ENST00000432346 324 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC104850.1-201ENST00000435940 476 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 TIMM9P1-201ENST00000436122 256 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 MTND1P12-201ENST00000455231 147 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC093899.1-201ENST00000457984 376 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RN7SL330P-201ENST00000469709 307 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RPL9P6-201ENST00000492764 598 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC010587.1-201ENST00000505809 469 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC022483.1-201ENST00000514020 567 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNU6-506P-201ENST00000516553 94 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 RNU6-798P-201ENST00000516912 103 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC009812.2-201ENST00000517657 457 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms