Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.414-201ENST00000384011 101 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 MIR607-201ENST00000385241 96 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 RNU2-64P-201ENST00000411315 191 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS11Q9H270 CYP4F29P-201ENST00000420685 446 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC114495.1-201ENST00000441274 436 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL121871.1-201ENST00000443413 436 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 DDX3P2-201ENST00000446138 111 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC010655.1-201ENST00000449336 292 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 SNRPGP5-201ENST00000456003 220 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC006512.1-201ENST00000468816 291 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS11Q9H270 RPL23AP72-201ENST00000492447 435 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 RPL7P23-201ENST00000493874 747 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 RNU6-273P-201ENST00000516937 96 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AP004242.1-201ENST00000533701 349 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS11Q9H270 AL118558.2-201ENST00000556294 238 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS11Q9H270 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VPS11Q9H270 uc_338.11-201ENST00000619132 160 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL162373.1-201ENST00000620433 407 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC078938.1-201ENST00000620993 318 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL353748.2-201ENST00000622148 471 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL161637.1-201ENST00000622380 412 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC112200.1-201ENST00000625015 234 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS11Q9H270 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 API5P2-201ENST00000397055 1498 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RNY4P16-201ENST00000364768 94 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 Y_RNA.367-201ENST00000365544 101 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RNU6-1074P-201ENST00000383995 104 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 SNORD37.1-201ENST00000390968 65 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 RN7SKP235-201ENST00000410662 305 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC096644.2-201ENST00000429278 159 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 TXNP1-201ENST00000441872 371 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 AC107399.1-201ENST00000451226 265 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RPL30P15-201ENST00000457129 321 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 Y_RNA.653-201ENST00000459091 95 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 RPL23AP2-201ENST00000471227 466 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC083904.1-201ENST00000487828 231 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 RN7SL812P-201ENST00000493791 279 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS11Q9H270 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RNU6-976P-201ENST00000516086 111 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 SNORD27.1-201ENST00000516319 72 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 RNA5SP337-201ENST00000517007 109 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC009812.2-201ENST00000517657 457 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 AP005435.4-201ENST00000529514 284 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC103843.2-201ENST00000530523 682 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 OR4K8P-201ENST00000578842 1048 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 UBE2L4-201ENST00000587688 464 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AF038458.1-201ENST00000588406 262 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS11Q9H270 AC121334.2-201ENST00000605387 271 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC107871.2-201ENST00000612894 502 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AC015967.1-201ENST00000619893 476 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS11Q9H270 AC092125.1-201ENST00000562568 1995 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS11Q9H270 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS11Q9H270 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
VPS11Q9H270 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS11Q9H270 ZNF519P1-201ENST00000449011 1626 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.32□□□□□ -1.72
VPS11Q9H270 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VPS11Q9H270 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC007685.1-201ENST00000329806 452 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 MIR135A2-201ENST00000384854 100 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC097374.1-203ENST00000400783 485 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 RPL37P10-201ENST00000412884 288 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 RPL7P10-201ENST00000417407 739 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 RPL7AP25-201ENST00000423357 805 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC119618.1-201ENST00000434191 222 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms