Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNA5SP468-201ENST00000516782 93 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 OR5G4P-201ENST00000525251 760 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 DEFB108D-201ENST00000527787 222 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.11□□□□□ -1.91
CDCA3Q99618 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.11□□□□□ -1.91
CDCA3Q99618 SYF2P1-201ENST00000550658 413 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
CDCA3Q99618 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CDCA3Q99618 ACTR3BP3-201ENST00000565577 979 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC097065.2-201ENST00000608159 533 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC239868.4-201ENST00000608318 671 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC004067.1-201ENST00000608733 700 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC090425.2-201ENST00000608818 501 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AL355472.4-201ENST00000610233 626 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC019226.1-201ENST00000625666 515 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDCA3Q99618 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDCA3Q99618 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
CDCA3Q99618 SNORA18.3-201ENST00000384122 132 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 SNORD116-1-201ENST00000384335 95 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 RPL17P12-201ENST00000413391 526 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AL356583.2-201ENST00000426536 280 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC244035.1-201ENST00000430042 390 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC098826.1-201ENST00000433943 471 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 RPL26P6-201ENST00000440913 438 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC009961.3-201ENST00000449832 765 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.1□□□□□ -1.91
CDCA3Q99618 SNRPGP9-201ENST00000456025 225 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
CDCA3Q99618 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.1□□□□□ -1.91
CDCA3Q99618 MTND4LP22-201ENST00000508209 276 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 HMGN1P28-201ENST00000521340 364 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDCA3Q99618 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.1□□□□□ -1.91
CDCA3Q99618 AL163153.1-201ENST00000554223 283 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC012414.6-201ENST00000568241 401 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.1□□□□□ -1.91
CDCA3Q99618 AC068790.3-201ENST00000602988 553 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC106900.2-201ENST00000604994 317 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC104010.1-201ENST00000616889 150 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 Z69908.1-201ENST00000622603 247 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
CDCA3Q99618 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDCA3Q99618 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDCA3Q99618 AC010733.2-201ENST00000589496 5702 ntBASIC3.1□□□□□ -1.91
CDCA3Q99618 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CDCA3Q99618 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CDCA3Q99618 RNU6-76P-201ENST00000384060 104 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RNU6-432P-201ENST00000384196 109 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RNU6-754P-201ENST00000391166 107 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RNU6-55P-201ENST00000411092 107 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RNA5SP508-201ENST00000411327 119 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RNU6-954P-201ENST00000411355 107 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.09□□□□□ -1.91
CDCA3Q99618 PPP1R11P2-201ENST00000423543 382 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDCA3Q99618 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AC006483.1-201ENST00000487308 313 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC112204.1-201ENST00000502591 103 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.09□□□□□ -1.91
CDCA3Q99618 OR5BM1P-201ENST00000512021 366 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC091965.2-201ENST00000512324 613 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 MTND5P13-201ENST00000513046 1079 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 SNORA31.22-201ENST00000517204 135 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AP002748.2-201ENST00000528671 348 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AC123904.2-201ENST00000548059 300 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 ZNF519P3-201ENST00000557158 1032 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AC068276.1-201ENST00000605793 379 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AL359757.2-201ENST00000624309 274 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AL159972.1-201ENST00000625150 448 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 AC025048.6-202ENST00000627667 438 ntBASIC3.09□□□□□ -1.91
CDCA3Q99618 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDCA3Q99618 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.09□□□□□ -1.91
CDCA3Q99618 AC005832.2-201ENST00000538921 1430 ntBASIC3.09□□□□□ -1.92
CDCA3Q99618 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
CDCA3Q99618 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.92
CDCA3Q99618 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.09□□□□□ -1.92
CDCA3Q99618 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDCA3Q99618 AC116096.1-201ENST00000566804 2314 ntBASIC3.08□□□□□ -1.92
CDCA3Q99618 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDCA3Q99618 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms