Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 OR10R1P-201ENST00000441524 1141 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RPL21P134-201ENST00000453468 483 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC087588.1-201ENST00000462203 316 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC104563.1-201ENST00000476147 376 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RPL31P41-201ENST00000477967 372 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC024589.1-201ENST00000512207 263 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC109445.1-201ENST00000512356 383 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RN7SKP24-201ENST00000515888 284 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 NRON-201ENST00000517270 370 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 UBTFL10-201ENST00000528532 562 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC123904.3-201ENST00000547218 814 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AP001269.3-201ENST00000588718 329 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 BX664608.1-201ENST00000610519 487 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC013476.2-201ENST00000614456 459 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 UCA1.1-201ENST00000620952 75 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL138713.1-201ENST00000624026 2130 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC022336.2-201ENST00000568966 2538 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC093536.2-201ENST00000565257 1406 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 RNU6-217P-201ENST00000384164 104 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 GTF2IP20-201ENST00000431663 360 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 RPS15AP7-201ENST00000439294 405 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 PIGFP3-201ENST00000441918 722 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC005410.1-202ENST00000460347 485 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 RPS20P20-201ENST00000460498 340 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC126182.1-201ENST00000478134 357 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 KC877373.1-201ENST00000479066 408 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 RPL23AP70-201ENST00000483361 460 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AL391261.3-201ENST00000557194 520 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 RPL23AP84-201ENST00000571193 464 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AL139344.1-201ENST00000605228 195 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC093838.1-201ENST00000613014 469 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AC019226.1-201ENST00000625666 515 ntBASIC2.6□□□□□ -1.99
RPRD1AQ96P16 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPRD1AQ96P16 U3.12-201ENST00000364498 214 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 MIR767-201ENST00000390228 109 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 RN7SKP140-201ENST00000411196 284 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC007919.1-201ENST00000429380 217 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 MTND1P9-201ENST00000453775 944 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AP1S2P1-201ENST00000457344 379 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC108729.1-201ENST00000487812 947 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC138853.1-201ENST00000503549 823 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 SUMO2P6-201ENST00000505273 288 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC116353.3-201ENST00000511215 249 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 MTCYBP23-201ENST00000558717 1102 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC007621.1-201ENST00000604544 437 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC090186.1-201ENST00000605991 572 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC009268.2-201ENST00000621925 457 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.59□□□□□ -1.99
RPRD1AQ96P16 AC099063.3-201ENST00000642066 185 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 DDX10P1-201ENST00000448545 1933 ntBASIC2.59□□□□□ -1.99
RPRD1AQ96P16 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.59□□□□□ -2
RPRD1AQ96P16 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
RPRD1AQ96P16 AL137003.2-201ENST00000606924 2538 ntBASIC2.59□□□□□ -2
RPRD1AQ96P16 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.58□□□□□ -2
RPRD1AQ96P16 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPRD1AQ96P16 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
RPRD1AQ96P16 ANAPC10P1-201ENST00000395991 556 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms