Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 ISCA1P6-201ENST00000427740 390 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 USP9YP15-201ENST00000442391 422 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 SNRPGP6-201ENST00000451124 220 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 SNORA18.6-201ENST00000516792 115 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 RNU6-928P-201ENST00000516876 104 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC245166.1-201ENST00000521012 253 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 OR5G4P-201ENST00000525251 760 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC128657.1-201ENST00000549459 145 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC007619.2-201ENST00000605743 379 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC087752.4-201ENST00000605911 462 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC098614.4-201ENST00000607601 462 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AL121772.2-201ENST00000614331 297 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AP001506.1-201ENST00000615444 211 ntBASIC4.27□□□□□ -1.73
CCDC136Q96JN2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC136Q96JN2 AC008264.2-201ENST00000610193 3731 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 RNU6-741P-201ENST00000383889 107 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 MIR554-201ENST00000384874 96 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 RPL23AP32-201ENST00000395315 459 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 ATP5A1P2-201ENST00000412323 255 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC007899.1-201ENST00000412776 775 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 ATG3P1-201ENST00000419507 911 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC007389.2-201ENST00000434630 306 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 SETP8-201ENST00000435341 628 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC093156.1-201ENST00000440382 670 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 GAPDHP17-201ENST00000449858 1001 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC115115.1-201ENST00000449927 248 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 RNA5SP217-201ENST00000515959 91 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AP000873.5-201ENST00000533906 236 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC079089.3-201ENST00000603094 673 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 AC080013.6-201ENST00000606185 215 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.26□□□□□ -1.73
CCDC136Q96JN2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC136Q96JN2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 RNA5SP252-201ENST00000391131 119 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AL139397.2-201ENST00000404529 772 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 MRPL50P2-201ENST00000416821 482 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 ELOCP4-201ENST00000420090 333 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 CST9LP2-201ENST00000437612 320 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AC244505.5-201ENST00000443639 207 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 MTND1P27-201ENST00000451117 902 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 RPS20P22-201ENST00000473700 357 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 SAP18P1-201ENST00000512058 390 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 RN7SKP258-201ENST00000517151 304 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 TRAV28-201ENST00000557548 323 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 MIR3913-1-201ENST00000577744 102 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 MIR4506-201ENST00000584693 77 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 BNIP3P33-201ENST00000598912 569 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AL392088.2-201ENST00000637607 285 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 GABRG2-229ENST00000641017 3628 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC136Q96JN2 AL049641.1-201ENST00000441055 1948 ntBASIC4.25□□□□□ -1.73
CCDC136Q96JN2 RNA5SP124-201ENST00000362739 110 ntBASIC4.24□□□□□ -1.73
CCDC136Q96JN2 RNU6-188P-201ENST00000364207 107 ntBASIC4.24□□□□□ -1.73
CCDC136Q96JN2 Y_RNA.359-201ENST00000365498 102 ntBASIC4.24□□□□□ -1.73
CCDC136Q96JN2 SNORA75-201ENST00000384158 137 ntBASIC4.24□□□□□ -1.73
CCDC136Q96JN2 RNU6-39P-201ENST00000384344 107 ntBASIC4.24□□□□□ -1.73
CCDC136Q96JN2 RNU6-348P-201ENST00000384386 107 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms