Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RPS23P3-201ENST00000470993 430 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RPL31P60-201ENST00000478450 367 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC105758.1-201ENST00000506038 399 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RNU6-408P-201ENST00000515910 100 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 MIR4697-201ENST00000582977 78 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 HMGB1P50-201ENST00000605814 607 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 AL161616.1-201ENST00000611867 286 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 MIR8062-201ENST00000621515 85 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
NUP43Q8NFH3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUP43Q8NFH3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.210-201ENST00000364161 110 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.424-201ENST00000384063 103 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.447-201ENST00000384184 113 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.489-201ENST00000384410 101 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AL603908.1-201ENST00000406098 201 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 MIR1252-201ENST00000408861 65 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 RN7SKP100-201ENST00000411258 284 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AL133396.1-201ENST00000432048 687 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 RPS15AP10-201ENST00000432472 382 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC016831.4-201ENST00000438302 307 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AL360271.2-201ENST00000447710 161 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC114801.2-201ENST00000503825 781 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 SNORD116-26-201ENST00000516006 96 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 RNY3P15-201ENST00000516297 97 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 HSBP1P1-201ENST00000555205 166 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 HMGB3P26-201ENST00000560051 582 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 RPL23AP87-202ENST00000573039 466 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 MIR3934-201ENST00000579806 107 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 MIR4480-201ENST00000582492 71 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC093227.2-201ENST00000589357 285 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 Z98751.3-201ENST00000604447 521 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 AC078938.1-201ENST00000620993 318 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 MIR4272-201ENST00000635924 64 ntBASIC4.35□□□□□ -1.71
NUP43Q8NFH3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP43Q8NFH3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 RPL21P1-201ENST00000399532 476 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 Z98745.1-201ENST00000402553 494 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 RPL21P90-201ENST00000415692 466 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 BX510359.2-201ENST00000417920 305 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 HMGB1P9-201ENST00000429856 646 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 ARL5AP4-201ENST00000430731 512 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC005154.2-201ENST00000438110 379 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 DYNLT3P2-201ENST00000442517 295 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 OSTCP8-201ENST00000445117 448 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AP000942.1-201ENST00000463969 747 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AP000926.1-201ENST00000479573 241 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC012158.1-204ENST00000483430 465 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 SNORA31.22-201ENST00000517204 135 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC104576.1-201ENST00000524225 88 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC009643.1-201ENST00000532030 391 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AL110118.1-201ENST00000553543 400 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC093591.2-201ENST00000565254 3843 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC209154.1-201ENST00000582156 337 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP43Q8NFH3 HMGN2P28-201ENST00000606102 262 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 SNORD91B-202ENST00000608459 222 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 MIR6853-201ENST00000619642 74 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 A2MP1-204ENST00000566278 4130 ntBASIC4.34□□□□□ -1.71
NUP43Q8NFH3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms