Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX6Q8HWS3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX6Q8HWS3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX6Q8HWS3 AC007256.1-201ENST00000392253 2765 ntBASIC3.73□□□□□ -1.81
RFX6Q8HWS3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.73□□□□□ -1.81
RFX6Q8HWS3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
RFX6Q8HWS3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC092326.2-201ENST00000624772 1561 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU6-511P-201ENST00000363496 107 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 XGY1-201ENST00000381172 446 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU6-39P-201ENST00000384344 107 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU6-1011P-201ENST00000384668 107 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 MIR1-2-201ENST00000384961 85 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC068050.1-201ENST00000394891 380 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AP000567.1-201ENST00000406413 156 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AL583834.1-201ENST00000406943 343 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNA5SP107-201ENST00000411358 122 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC091390.1-201ENST00000433904 331 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 VDAC1P3-201ENST00000434069 851 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RPS20P5-201ENST00000434808 360 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 HMGB1P12-201ENST00000438594 598 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 SEPT14P3-201ENST00000439401 183 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 USP9YP8-201ENST00000441913 500 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AL732372.2-207ENST00000445840 183 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC016696.1-201ENST00000446949 318 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 SEPT14P2-201ENST00000453405 183 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 FTH1P2-201ENST00000466086 412 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AP000852.1-201ENST00000472460 573 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC091951.2-201ENST00000500762 203 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 SEPT14P4-201ENST00000513445 186 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU7-51P-201ENST00000516560 62 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU6-358P-201ENST00000516564 75 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 RNU6-64P-201ENST00000517119 105 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 FO082796.1-201ENST00000523795 183 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 MIR8058-201ENST00000615737 89 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC010133.1-201ENST00000615809 842 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 AC119674.1-207ENST00000641355 633 ntBASIC3.72□□□□□ -1.81
RFX6Q8HWS3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX6Q8HWS3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RFX6Q8HWS3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
RFX6Q8HWS3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RNU6-74P-201ENST00000384235 107 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 MIR135A2-201ENST00000384854 100 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 MIR558-201ENST00000384920 94 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RN7SKP159-201ENST00000410657 292 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC009237.5-201ENST00000414271 501 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RPS7P15-201ENST00000415804 584 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC012498.1-201ENST00000424037 437 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AL606489.2-201ENST00000433886 234 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RPS15AP9-201ENST00000439856 381 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC005094.1-201ENST00000440420 368 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 CALM1P1-201ENST00000442082 433 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 MTND1P11-201ENST00000456661 876 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RNU6-261P-201ENST00000459506 102 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC007537.2-201ENST00000472093 511 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RPS15AP36-201ENST00000492022 382 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC008628.2-201ENST00000502605 298 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RNU6-875P-201ENST00000516488 106 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RN7SKP21-201ENST00000516503 220 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX6Q8HWS3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms