Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRC28Q86X40 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC109464.2-201ENST00000510242 943 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRC28Q86X40 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 YWHAZP1-201ENST00000556286 722 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC093519.1-201ENST00000566109 298 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC011260.1-201ENST00000578420 472 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC022662.1-201ENST00000580252 331 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC091946.2-201ENST00000606105 291 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AP000254.1-201ENST00000609934 520 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.74□□□□□ -2.13
LRRC28Q86X40 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LRRC28Q86X40 AP001486.3-201ENST00000615334 372 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AL445493.3-201ENST00000619568 477 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AL118508.4-201ENST00000624142 1176 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 AC080188.3-201ENST00000624842 748 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 MTCO1P4-201ENST00000520516 1409 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 DDX10P1-201ENST00000448545 1933 ntBASIC1.74□□□□□ -2.13
LRRC28Q86X40 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LRRC28Q86X40 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LRRC28Q86X40 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 RNU6-549P-201ENST00000384433 107 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 MIR135A2-201ENST00000384854 100 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 RPL22P22-201ENST00000395439 379 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 MTND3P20-201ENST00000407663 186 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 ZNF90P2-204ENST00000419323 1075 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 HMGN2P19-201ENST00000425149 265 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC098614.2-201ENST00000426040 255 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC092573.2-201ENST00000434546 243 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 MTCYBP45-201ENST00000435243 565 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 MTCO1P48-201ENST00000448024 1096 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 COX6CP18-201ENST00000448769 222 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 MTATP6P7-201ENST00000453315 681 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 USP9YP34-201ENST00000453983 808 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC091860.1-201ENST00000505723 432 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 RNU5A-7P-201ENST00000515979 116 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 RN7SKP31-201ENST00000516354 278 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC135628.1-201ENST00000568867 534 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 MIR4789-201ENST00000577469 82 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC136601.2-201ENST00000604356 474 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AL450336.1-201ENST00000605180 586 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC103710.4-201ENST00000609301 899 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC103710.1-201ENST00000610003 901 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 AL512506.2-201ENST00000624472 458 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 ZNF355P-201ENST00000427301 3216 ntBASIC1.73□□□□□ -2.13
LRRC28Q86X40 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LRRC28Q86X40 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 MIR16-2-201ENST00000362117 81 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 RNU6-270P-201ENST00000364131 105 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 RNA5SP88-201ENST00000365560 109 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 RPL35AP22-201ENST00000436855 335 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL589880.1-201ENST00000448271 287 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC006390.1-201ENST00000508068 283 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 SNORA48.10-201ENST00000516965 160 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AP005902.1-201ENST00000521358 186 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 HMGB1P14-201ENST00000557424 591 ntBASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.72□□□□□ -2.13
LRRC28Q86X40 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRC28Q86X40 SUGT1P1-201ENST00000379514 476 ntBASIC1.71□□□□□ -2.14
LRRC28Q86X40 RPS3AP24-201ENST00000407896 734 ntBASIC1.71□□□□□ -2.14
LRRC28Q86X40 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
LRRC28Q86X40 RNU2-15P-201ENST00000410692 191 ntBASIC1.71□□□□□ -2.14
LRRC28Q86X40 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRC28Q86X40 BX276092.3-201ENST00000424182 230 ntBASIC1.71□□□□□ -2.14
LRRC28Q86X40 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRC28Q86X40 AC027124.2-201ENST00000428249 105 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms