Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC036111.3-201ENST00000526389 112 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC092451.2-201ENST00000538746 658 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC008083.4-201ENST00000615076 444 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC068831.7-201ENST00000616954 363 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 MTND5P9-201ENST00000503854 1755 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RNU1-109P-201ENST00000383960 147 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 MIR1197-201ENST00000408818 88 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 OR9N1P-202ENST00000494289 481 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AP003122.6-201ENST00000623831 495 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 MIR524-201ENST00000385242 87 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RNA5SP498-201ENST00000411342 120 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 NUP35P2-201ENST00000416748 943 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC023347.2-201ENST00000433994 462 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 LSM1P1-201ENST00000438629 273 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RPL31P20-201ENST00000449593 360 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC084373.1-201ENST00000603311 235 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 DUXAP3-201ENST00000603616 594 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AL590282.1-201ENST00000610379 1136 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC080100.1-201ENST00000624239 5356 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RFESDP1-201ENST00000422350 461 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 TMEM167AP1-201ENST00000423409 219 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 RNA5SP395-201ENST00000516567 118 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 SNORA31.23-201ENST00000517219 133 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC140725.3-201ENST00000616193 880 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 AC011330.2-201ENST00000621680 635 ntBASIC0.85□□□□□ -2.27
CSMD3Q7Z407 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 SNORA18.2-201ENST00000383865 132 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 OR51AB1P-201ENST00000429046 620 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 FO393415.2-201ENST00000480085 343 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 DUXAP5-201ENST00000529668 529 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AP004247.1-201ENST00000531556 1289 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AP003717.3-201ENST00000544832 1180 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 COX6CP3-201ENST00000580869 223 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC015849.6-201ENST00000605454 474 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC123912.5-201ENST00000605470 343 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AL391834.1-201ENST00000609609 560 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 AC011472.4-201ENST00000615848 491 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CSMD3Q7Z407 SDAD1P2-201ENST00000441308 2028 ntBASIC0.84□□□□□ -2.27
CSMD3Q7Z407 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 ARL5AP3-201ENST00000439327 386 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 RPL21P93-201ENST00000480465 489 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC233702.1-201ENST00000482905 502 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC093591.1-201ENST00000491435 481 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC009901.1-201ENST00000506703 541 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC108157.1-201ENST00000510511 539 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 MTCYBP41-201ENST00000528913 1123 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC069304.3-201ENST00000603938 1084 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC008133.2-201ENST00000624540 351 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 CD24P4-201ENST00000382840 243 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 Y_RNA.471-201ENST00000384312 102 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 SNRPFP3-201ENST00000457792 225 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 CDC42P4-201ENST00000510507 563 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 RNU6-1073P-201ENST00000517182 106 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 MIR3117-201ENST00000584034 78 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 AL445493.3-201ENST00000619568 477 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.84□□□□□ -2.28
CSMD3Q7Z407 MIR203B-201ENST00000636080 86 ntBASIC0.84□□□□□ -2.28
CSMD3Q7Z407 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CSMD3Q7Z407 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
CSMD3Q7Z407 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.83□□□□□ -2.28
CSMD3Q7Z407 AC093716.1-201ENST00000435923 377 ntBASIC0.83□□□□□ -2.28
CSMD3Q7Z407 AC010285.1-201ENST00000470580 392 ntBASIC0.83□□□□□ -2.28
CSMD3Q7Z407 MRPL42P6-201ENST00000486397 371 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms