Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 RPS3AP24-201ENST00000407896 734 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 C1DP2-201ENST00000418167 426 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC019097.1-201ENST00000424783 735 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 ISCA1P6-201ENST00000427740 390 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 ELOCP30-201ENST00000447108 299 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 VN1R34P-201ENST00000447387 883 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 NANOGNBP1-201ENST00000448444 480 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC008155.2-201ENST00000464337 397 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC104472.2-201ENST00000469035 601 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 RPL21P129-201ENST00000491732 478 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 RPL7P23-201ENST00000493874 747 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC138853.1-201ENST00000503549 823 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 RNU6-430P-201ENST00000517078 107 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC018630.1-201ENST00000541376 925 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC125611.2-201ENST00000551907 647 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 ZNF415P1-201ENST00000582279 1166 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC068790.2-201ENST00000602601 557 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 DUXAP4-201ENST00000603046 613 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC073648.5-201ENST00000603502 305 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AP003122.6-201ENST00000623831 495 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PACS1Q6VY07 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.3□□□□□ -1.88
PACS1Q6VY07 AC092447.7-201ENST00000422212 1621 ntBASIC3.3□□□□□ -1.88
PACS1Q6VY07 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PACS1Q6VY07 OR5J1P-201ENST00000313544 939 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PACS1Q6VY07 Y_RNA.3-201ENST00000362331 103 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 RNU5E-1-201ENST00000362477 120 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 RNU4-1-201ENST00000363925 141 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 Y_RNA.505-201ENST00000384489 102 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 MIR183-201ENST00000384958 110 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 RNU6-882P-201ENST00000391025 103 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 MIR887-201ENST00000401258 79 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 RNU6-516P-201ENST00000411381 104 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 MRPL50P2-201ENST00000416821 482 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 CCDC58P2-201ENST00000417131 366 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC073614.1-201ENST00000438690 650 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL121871.1-201ENST00000443413 436 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 RPL23AP41-201ENST00000484754 458 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 CDC42P4-201ENST00000510507 563 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 DUXAP2-201ENST00000519198 589 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AP003033.1-201ENST00000527244 415 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL133153.1-201ENST00000557756 303 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 MIR3146-201ENST00000580367 79 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL161729.4-201ENST00000604650 476 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC007038.2-201ENST00000608095 740 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC013476.2-201ENST00000614456 459 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL450472.3-201ENST00000615578 367 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL360181.4-201ENST00000621752 134 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 PISRT1-201ENST00000626175 531 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 AL138713.1-201ENST00000624026 2130 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PACS1Q6VY07 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
PACS1Q6VY07 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PACS1Q6VY07 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.28□□□□□ -1.88
PACS1Q6VY07 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms