Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CKAP4Q07065 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 MIRLET7G-201ENST00000362280 84 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 Y_RNA.318-201ENST00000365131 97 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CKAP4Q07065 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CKAP4Q07065 RNA5SP252-201ENST00000391131 119 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 RNU6-952P-201ENST00000391164 108 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 RPS4XP3-201ENST00000398541 413 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 UBA52P6-201ENST00000399822 382 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 FO393413.1-201ENST00000402892 195 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC083875.1-201ENST00000419509 405 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 RPL35AP12-201ENST00000425362 338 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.59□□□□□ -1.99
CKAP4Q07065 MTCO1P27-201ENST00000448269 226 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 KATNBL1P6-201ENST00000453433 915 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 MEMO1P3-201ENST00000459811 302 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 RPL31P50-201ENST00000471002 296 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC096751.1-202ENST00000502691 1067 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AIG1P1-201ENST00000503376 148 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC009901.1-201ENST00000506703 541 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC093809.1-201ENST00000509155 340 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC012435.1-202ENST00000568772 240 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.59□□□□□ -1.99
CKAP4Q07065 AC138761.3-201ENST00000579993 334 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AP001004.1-201ENST00000582468 324 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC019159.1-201ENST00000605094 187 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AL159169.3-201ENST00000608871 561 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC084782.3-201ENST00000612282 578 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC011890.2-201ENST00000613393 294 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AL158063.1-201ENST00000615349 536 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 U4.3-201ENST00000621047 82 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC008443.7-201ENST00000622195 246 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC002064.3-201ENST00000623448 346 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AL356596.1-201ENST00000624230 379 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 AC005336.3-201ENST00000623833 2679 ntBASIC2.59□□□□□ -2
CKAP4Q07065 AC138915.1-201ENST00000565427 1685 ntBASIC2.59□□□□□ -2
CKAP4Q07065 AL390237.1-201ENST00000404226 1415 ntBASIC2.59□□□□□ -2
CKAP4Q07065 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
CKAP4Q07065 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CKAP4Q07065 MIR21-201ENST00000362134 72 ntBASIC2.58□□□□□ -2
CKAP4Q07065 Y_RNA.51-201ENST00000362725 102 ntBASIC2.58□□□□□ -2
CKAP4Q07065 RNU4-24P-201ENST00000364565 139 ntBASIC2.58□□□□□ -2
CKAP4Q07065 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CKAP4Q07065 RNVU1-14-201ENST00000384770 164 ntBASIC2.58□□□□□ -2
CKAP4Q07065 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.58□□□□□ -2
CKAP4Q07065 AL389915.1-201ENST00000422463 466 ntBASIC2.58□□□□□ -2
CKAP4Q07065 MED14P1-201ENST00000430517 648 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL117351.1-201ENST00000438864 766 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL512286.1-201ENST00000439244 400 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 MTND1P30-201ENST00000441241 901 ntBASIC2.58□□□□□ -2
CKAP4Q07065 MTND5P14-201ENST00000441481 1267 ntBASIC2.58□□□□□ -2
CKAP4Q07065 PRSS3P4-201ENST00000453323 162 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.58□□□□□ -2
CKAP4Q07065 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.58□□□□□ -2
CKAP4Q07065 AC093767.1-201ENST00000504523 156 ntBASIC2.58□□□□□ -2
CKAP4Q07065 MTND5P13-201ENST00000513046 1079 ntBASIC2.58□□□□□ -2
CKAP4Q07065 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CKAP4Q07065 COX6CP8-201ENST00000522620 226 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.58□□□□□ -2
CKAP4Q07065 AC007115.1-201ENST00000546853 234 ntBASIC2.58□□□□□ -2
CKAP4Q07065 OR6C7P-201ENST00000547875 934 ntBASIC2.58□□□□□ -2
CKAP4Q07065 CCNG2P1-201ENST00000549521 1000 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC078814.3-201ENST00000553036 491 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 GLUD1P4-201ENST00000590914 418 ntBASIC2.58□□□□□ -2
CKAP4Q07065 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.58□□□□□ -2
CKAP4Q07065 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.58□□□□□ -2
CKAP4Q07065 AL355812.1-201ENST00000603215 216 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL513477.2-201ENST00000607858 568 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AC073114.1-201ENST00000612027 490 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL138880.2-201ENST00000616214 239 ntBASIC2.58□□□□□ -2
CKAP4Q07065 AL357080.1-201ENST00000617394 239 ntBASIC2.58□□□□□ -2
CKAP4Q07065 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.58□□□□□ -2
CKAP4Q07065 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms