Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH12P55289 BNIP3P30-201ENST00000601184 574 ntBASIC3.39□□□□□ -1.87
CDH12P55289 MIR6875-201ENST00000617506 72 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC022306.2-201ENST00000617563 647 ntBASIC3.39□□□□□ -1.87
CDH12P55289 U6.42-201ENST00000618440 107 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC068831.8-201ENST00000620171 435 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AL360181.4-201ENST00000621752 134 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC024940.5-201ENST00000622889 474 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC024614.3-201ENST00000637860 256 ntBASIC3.39□□□□□ -1.87
CDH12P55289 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH12P55289 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CDH12P55289 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CDH12P55289 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH12P55289 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH12P55289 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
CDH12P55289 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH12P55289 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH12P55289 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH12P55289 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDH12P55289 RPL7P26-201ENST00000333817 754 ntBASIC3.38□□□□□ -1.87
CDH12P55289 Y_RNA.255-201ENST00000364581 97 ntBASIC3.38□□□□□ -1.87
CDH12P55289 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
CDH12P55289 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDH12P55289 RNU6-701P-201ENST00000384059 107 ntBASIC3.38□□□□□ -1.87
CDH12P55289 SNORA24.1-201ENST00000384401 135 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC009237.5-201ENST00000414271 501 ntBASIC3.38□□□□□ -1.87
CDH12P55289 MTCYBP8-201ENST00000422855 651 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
CDH12P55289 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH12P55289 H2AFZP6-201ENST00000444403 394 ntBASIC3.38□□□□□ -1.87
CDH12P55289 TPT1P12-201ENST00000448968 492 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC073415.1-201ENST00000449240 153 ntBASIC3.38□□□□□ -1.87
CDH12P55289 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
CDH12P55289 RN7SL432P-201ENST00000484057 298 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL163973.1-201ENST00000484753 577 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH12P55289 AC004062.1-201ENST00000509926 645 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH12P55289 NRON-201ENST00000517270 370 ntBASIC3.38□□□□□ -1.87
CDH12P55289 OR5B19P-201ENST00000531766 928 ntBASIC3.38□□□□□ -1.87
CDH12P55289 OR5AL2P-201ENST00000532185 920 ntBASIC3.38□□□□□ -1.87
CDH12P55289 SNRPGP16-201ENST00000533275 226 ntBASIC3.38□□□□□ -1.87
CDH12P55289 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.38□□□□□ -1.87
CDH12P55289 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.38□□□□□ -1.87
CDH12P55289 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL121579.1-201ENST00000555129 305 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDH12P55289 AC012182.1-201ENST00000570133 895 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH12P55289 AC006270.2-201ENST00000578523 652 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.38□□□□□ -1.87
CDH12P55289 AC060780.3-201ENST00000589464 80 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL049634.3-201ENST00000604968 457 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
CDH12P55289 ZYXP1-201ENST00000617638 118 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL589994.2-201ENST00000621124 579 ntBASIC3.38□□□□□ -1.87
CDH12P55289 FRG1KP-201ENST00000623592 341 ntBASIC3.38□□□□□ -1.87
CDH12P55289 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
CDH12P55289 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.38□□□□□ -1.87
CDH12P55289 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AC092326.2-201ENST00000624772 1561 ntBASIC3.38□□□□□ -1.87
CDH12P55289 CASC19-280ENST00000642102 1351 ntBASIC3.38□□□□□ -1.87
CDH12P55289 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.38□□□□□ -1.87
CDH12P55289 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 MTND5P17-201ENST00000418405 1603 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 AC007656.2-201ENST00000624902 4547 ntBASIC3.37□□□□□ -1.87
CDH12P55289 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
CDH12P55289 MIR30B-201ENST00000384850 88 ntBASIC3.37□□□□□ -1.87
CDH12P55289 MT-TL1-201ENST00000386347 75 ntBASIC3.37□□□□□ -1.87
CDH12P55289 NDUFS5P1-201ENST00000405668 289 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
CDH12P55289 OR9R1P-201ENST00000412200 877 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC138393.2-201ENST00000414742 246 ntBASIC3.37□□□□□ -1.87
CDH12P55289 SNRPEP10-201ENST00000420249 274 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH12P55289 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH12P55289 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH12P55289 MRPS31P2-201ENST00000451581 518 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH12P55289 RNU7-182P-201ENST00000459009 62 ntBASIC3.37□□□□□ -1.87
CDH12P55289 GMFBP1-201ENST00000467831 427 ntBASIC3.37□□□□□ -1.87
CDH12P55289 RPL7L1P8-201ENST00000469911 741 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
CDH12P55289 VN1R104P-201ENST00000505115 1009 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC092436.1-201ENST00000506450 503 ntBASIC3.37□□□□□ -1.87
CDH12P55289 MIR2116-201ENST00000517221 80 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AP006587.4-201ENST00000526053 529 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms