Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 WISP1-OT1-201ENST00000602893 642 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 U73023.1-201ENST00000603134 700 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC103710.1-201ENST00000610003 901 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC090970.3-201ENST00000612566 866 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.25□□□□□ -1.89
LIMK1P53667 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
LIMK1P53667 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC138915.1-201ENST00000565427 1685 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LIMK1P53667 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RNU5F-6P-201ENST00000362979 116 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RNU1-39P-201ENST00000383897 165 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RNU6-533P-201ENST00000384144 107 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 MIR514A1-201ENST00000385133 98 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AL109755.1-201ENST00000401791 649 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.24□□□□□ -1.89
LIMK1P53667 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC063979.1-201ENST00000415539 377 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 Z99497.1-201ENST00000421282 135 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.24□□□□□ -1.89
LIMK1P53667 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 OR2B8P-201ENST00000432841 938 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 GDI2P2-201ENST00000445131 608 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.24□□□□□ -1.89
LIMK1P53667 RNU7-59P-201ENST00000459101 61 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RPL30P5-201ENST00000494923 336 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC112198.1-201ENST00000505369 1220 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RNU6-237P-201ENST00000515985 71 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.24□□□□□ -1.89
LIMK1P53667 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIMK1P53667 AL161629.2-201ENST00000615347 275 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.24□□□□□ -1.89
LIMK1P53667 AC012150.2-201ENST00000621300 544 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 AC002064.3-201ENST00000623448 346 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 MTND5P7-201ENST00000413558 1798 ntBASIC3.24□□□□□ -1.89
LIMK1P53667 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIMK1P53667 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LIMK1P53667 SNORA36C-201ENST00000384289 132 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 MIR19A-201ENST00000384878 82 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 AC126124.2-201ENST00000413542 321 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 RPL21P24-201ENST00000413752 448 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 RPL7P10-201ENST00000417407 739 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 AL445567.1-201ENST00000439121 144 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 AC118469.1-201ENST00000442943 488 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 BMI1P1-201ENST00000445879 941 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 Z96811.1-201ENST00000445880 108 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 RPS20P20-201ENST00000460498 340 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 RAC1P5-201ENST00000512182 576 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC106038.2-201ENST00000520706 568 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC087373.1-201ENST00000524920 491 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.23□□□□□ -1.89
LIMK1P53667 AL133153.1-201ENST00000557756 303 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 AC008088.1-201ENST00000580993 280 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 AC020895.1-201ENST00000595362 272 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC078899.3-201ENST00000599065 212 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC105129.3-201ENST00000605455 485 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC010133.1-201ENST00000615809 842 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 ATP5A1P2-202ENST00000616464 443 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
LIMK1P53667 AC018692.3-201ENST00000623929 123 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC010149.2-201ENST00000637608 315 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 AC007656.2-201ENST00000624902 4547 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
LIMK1P53667 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
LIMK1P53667 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIMK1P53667 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LIMK1P53667 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms