Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 GSTA11P-201ENST00000452866 669 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 AC117522.2-201ENST00000510049 657 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL12P48061 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 OR11H5P-201ENST00000554039 926 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL12P48061 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 AC012119.1-201ENST00000603184 222 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AC009220.3-201ENST00000604318 586 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AC012443.1-201ENST00000605605 231 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AC002076.2-201ENST00000617362 122 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 AC116618.1-201ENST00000634617 774 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CXCL12P48061 AC138915.1-201ENST00000565427 1685 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL12P48061 HSPA8P4-201ENST00000511877 1920 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CXCL12P48061 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CXCL12P48061 AL356473.1-201ENST00000406203 1408 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CXCL12P48061 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL12P48061 FRG1BP-201ENST00000278882 761 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL12P48061 RNU6-173P-201ENST00000364215 104 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 Y_RNA.338-201ENST00000365320 114 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL12P48061 BEND7P1-201ENST00000422058 457 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.26□□□□□ -2.05
CXCL12P48061 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL12P48061 MTND4P6-201ENST00000438297 472 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 SDCBPP1-201ENST00000440192 890 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.26□□□□□ -2.05
CXCL12P48061 OR6K5P-201ENST00000447050 945 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC092155.2-201ENST00000454675 477 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 BX322784.1-201ENST00000455793 1077 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC097493.1-201ENST00000463958 372 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 MTND1P16-201ENST00000465177 898 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC021146.8-201ENST00000507455 733 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC079395.1-201ENST00000510981 262 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 RNU6-150P-201ENST00000516237 95 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 RNU6-295P-201ENST00000516901 104 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC022690.1-201ENST00000526681 550 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CXCL12P48061 OR5BN1P-201ENST00000532955 829 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.26□□□□□ -2.05
CXCL12P48061 OR7K1P-201ENST00000546439 926 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CXCL12P48061 OR4K7P-201ENST00000580232 945 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC016727.1-205ENST00000605437 569 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC106052.1-201ENST00000608029 497 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC009318.2-201ENST00000610917 651 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.26□□□□□ -2.05
CXCL12P48061 AL596245.1-201ENST00000618994 362 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.26□□□□□ -2.05
CXCL12P48061 AC080128.1-201ENST00000474389 1917 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AC006378.2-201ENST00000623178 2476 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 AL079343.1-201ENST00000572358 1771 ntBASIC2.26□□□□□ -2.05
CXCL12P48061 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 AL513185.3-201ENST00000433335 1300 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 RNU6-28P-201ENST00000362378 107 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 Y_RNA.311-201ENST00000365068 96 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 Y_RNA.465-201ENST00000384293 102 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 MIR493-201ENST00000385254 89 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 MTCO2P8-201ENST00000412213 658 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 MTCO2P5-201ENST00000422621 426 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL12P48061 ISCA1P6-201ENST00000427740 390 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.25□□□□□ -2.05
CXCL12P48061 AC024082.2-201ENST00000434771 238 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 MTCYBP34-201ENST00000439552 670 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.25□□□□□ -2.05
CXCL12P48061 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CXCL12P48061 RPL21P134-201ENST00000453468 483 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 MTND4P2-201ENST00000507767 1203 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC116353.3-201ENST00000511215 249 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 Y_RNA.673-201ENST00000516306 88 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 SNORA70.16-201ENST00000516390 95 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 DEFB131D-201ENST00000526803 184 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CXCL12P48061 CYCSP2-201ENST00000558168 301 ntBASIC2.25□□□□□ -2.05
CXCL12P48061 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.25□□□□□ -2.05
CXCL12P48061 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms