Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.65□□□□□ -1.99
SSR1P43307 AC098614.2-201ENST00000426040 255 ntBASIC2.65□□□□□ -1.99
SSR1P43307 AC008850.1-201ENST00000427546 362 ntBASIC2.65□□□□□ -1.99
SSR1P43307 MTCYBP3-201ENST00000445588 1137 ntBASIC2.65□□□□□ -1.99
SSR1P43307 ZNF886P-201ENST00000450781 723 ntBASIC2.65□□□□□ -1.99
SSR1P43307 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.65□□□□□ -1.99
SSR1P43307 ANKRD26P4-201ENST00000455755 950 ntBASIC2.65□□□□□ -1.99
SSR1P43307 MTND4LP3-201ENST00000468320 276 ntBASIC2.65□□□□□ -1.99
SSR1P43307 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.65□□□□□ -1.99
SSR1P43307 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.65□□□□□ -1.99
SSR1P43307 AC112206.4-201ENST00000515142 405 ntBASIC2.65□□□□□ -1.99
SSR1P43307 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
SSR1P43307 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.65□□□□□ -1.99
SSR1P43307 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.65□□□□□ -1.99
SSR1P43307 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.65□□□□□ -1.99
SSR1P43307 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.65□□□□□ -1.99
SSR1P43307 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.65□□□□□ -1.99
SSR1P43307 AC023813.2-201ENST00000564321 469 ntBASIC2.65□□□□□ -1.99
SSR1P43307 LARP7P3-201ENST00000579888 337 ntBASIC2.65□□□□□ -1.99
SSR1P43307 AC069431.2-201ENST00000604149 1099 ntBASIC2.65□□□□□ -1.99
SSR1P43307 OR2AS2P-201ENST00000606902 342 ntBASIC2.65□□□□□ -1.99
SSR1P43307 AC103710.4-201ENST00000609301 899 ntBASIC2.65□□□□□ -1.99
SSR1P43307 MIR7106-201ENST00000612419 65 ntBASIC2.65□□□□□ -1.99
SSR1P43307 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.65□□□□□ -1.99
SSR1P43307 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.65□□□□□ -1.99
SSR1P43307 AC005832.2-201ENST00000538921 1430 ntBASIC2.65□□□□□ -1.99
SSR1P43307 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSR1P43307 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SSR1P43307 AL136310.1-201ENST00000404926 654 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 SPA17P1-201ENST00000416656 452 ntBASIC2.64□□□□□ -1.99
SSR1P43307 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.64□□□□□ -1.99
SSR1P43307 NDUFB4P7-201ENST00000423198 363 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC098826.1-201ENST00000433943 471 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AL714022.1-201ENST00000439897 151 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 MTCO1P53-201ENST00000441633 699 ntBASIC2.64□□□□□ -1.99
SSR1P43307 GPM6BP3-201ENST00000442797 145 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.64□□□□□ -1.99
SSR1P43307 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 MEMO1P3-201ENST00000459811 302 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AL049829.1-201ENST00000465411 156 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC116337.2-201ENST00000477662 156 ntBASIC2.64□□□□□ -1.99
SSR1P43307 RPS29P20-201ENST00000489592 171 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC079804.2-201ENST00000490376 200 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC090255.1-201ENST00000495779 349 ntBASIC2.64□□□□□ -1.99
SSR1P43307 SUMO2P6-201ENST00000505273 288 ntBASIC2.64□□□□□ -1.99
SSR1P43307 DEFB131D-201ENST00000526803 184 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AP003497.1-201ENST00000528472 562 ntBASIC2.64□□□□□ -1.99
SSR1P43307 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SSR1P43307 AC243972.3-201ENST00000539655 198 ntBASIC2.64□□□□□ -1.99
SSR1P43307 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
SSR1P43307 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.64□□□□□ -1.99
SSR1P43307 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.64□□□□□ -1.99
SSR1P43307 MTND4LP5-201ENST00000605152 292 ntBASIC2.64□□□□□ -1.99
SSR1P43307 AC025594.3-201ENST00000613068 790 ntBASIC2.64□□□□□ -1.99
SSR1P43307 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.64□□□□□ -1.99
SSR1P43307 AC013437.2-201ENST00000639587 677 ntBASIC2.64□□□□□ -1.99
SSR1P43307 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.64□□□□□ -1.99
SSR1P43307 AC005336.3-201ENST00000623833 2679 ntBASIC2.64□□□□□ -1.99
SSR1P43307 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSR1P43307 FAM133CP-201ENST00000332869 704 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AL122016.1-201ENST00000403365 367 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AC096664.2-201ENST00000411843 406 ntBASIC2.63□□□□□ -1.99
SSR1P43307 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.63□□□□□ -1.99
SSR1P43307 TIMM9P2-201ENST00000419324 266 ntBASIC2.63□□□□□ -1.99
SSR1P43307 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
SSR1P43307 MTCO2P17-201ENST00000424336 677 ntBASIC2.63□□□□□ -1.99
SSR1P43307 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.63□□□□□ -1.99
SSR1P43307 ATP5F1P1-201ENST00000433775 569 ntBASIC2.63□□□□□ -1.99
SSR1P43307 PIGFP3-201ENST00000441918 722 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
SSR1P43307 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SSR1P43307 AC090515.1-201ENST00000465295 476 ntBASIC2.63□□□□□ -1.99
SSR1P43307 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.63□□□□□ -1.99
SSR1P43307 AC108729.1-201ENST00000487812 947 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AC022493.1-201ENST00000492984 337 ntBASIC2.63□□□□□ -1.99
SSR1P43307 MIR514B-201ENST00000516774 80 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AC124947.2-202ENST00000552735 133 ntBASIC2.63□□□□□ -1.99
SSR1P43307 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.63□□□□□ -1.99
SSR1P43307 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.63□□□□□ -1.99
SSR1P43307 AL138976.2-201ENST00000563989 694 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.63□□□□□ -1.99
SSR1P43307 AL138478.1-201ENST00000612252 832 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
SSR1P43307 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSR1P43307 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.63□□□□□ -1.99
SSR1P43307 AC005539.1-201ENST00000443768 1479 ntBASIC2.63□□□□□ -1.99
SSR1P43307 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSR1P43307 AL109809.4-201ENST00000603520 2185 ntBASIC2.63□□□□□ -1.99
SSR1P43307 AL049641.1-201ENST00000441055 1948 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC007785.2-201ENST00000598627 1916 ntBASIC2.62□□□□□ -1.99
SSR1P43307 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SSR1P43307 RNU6-97P-201ENST00000363387 104 ntBASIC2.62□□□□□ -1.99
SSR1P43307 SNORA51.11-201ENST00000384442 131 ntBASIC2.62□□□□□ -1.99
SSR1P43307 RNU6-1035P-201ENST00000384477 107 ntBASIC2.62□□□□□ -1.99
SSR1P43307 MIR483-201ENST00000385070 76 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms