Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 HSPE1P3-201ENST00000559254 309 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.1□□□□□ -2.07
RPA3P35244 AC005776.1-201ENST00000603164 290 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC009314.1-201ENST00000603871 304 ntBASIC2.1□□□□□ -2.07
RPA3P35244 MTND4LP5-201ENST00000605152 292 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC080013.4-201ENST00000607624 649 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AL596245.1-201ENST00000618994 362 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AL157770.1-201ENST00000623049 439 ntBASIC2.1□□□□□ -2.07
RPA3P35244 AC087821.2-201ENST00000637086 450 ntBASIC2.1□□□□□ -2.07
RPA3P35244 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.09□□□□□ -2.07
RPA3P35244 MTCO1P9-201ENST00000505577 1534 ntBASIC2.09□□□□□ -2.07
RPA3P35244 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RPA3P35244 SNORA67.1-201ENST00000364749 141 ntBASIC2.09□□□□□ -2.07
RPA3P35244 RN7SKP226-201ENST00000364912 300 ntBASIC2.09□□□□□ -2.07
RPA3P35244 SNORD65.1-201ENST00000390889 71 ntBASIC2.09□□□□□ -2.07
RPA3P35244 SNORA3.2-201ENST00000408221 125 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC092047.1-201ENST00000424997 240 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC008850.1-201ENST00000427546 362 ntBASIC2.09□□□□□ -2.07
RPA3P35244 UBE2D3P1-201ENST00000436669 444 ntBASIC2.09□□□□□ -2.07
RPA3P35244 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPA3P35244 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
RPA3P35244 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.09□□□□□ -2.07
RPA3P35244 AC244505.3-201ENST00000454598 187 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 AC233279.1-201ENST00000455300 423 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.09□□□□□ -2.07
RPA3P35244 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPA3P35244 MTCO2P9-201ENST00000503214 694 ntBASIC2.09□□□□□ -2.07
RPA3P35244 ANXA2P1-201ENST00000505539 926 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC104090.1-201ENST00000506341 1171 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC022447.3-201ENST00000506865 495 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.09□□□□□ -2.07
RPA3P35244 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 AC008549.1-201ENST00000512900 643 ntBASIC2.09□□□□□ -2.07
RPA3P35244 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC022861.1-201ENST00000522981 663 ntBASIC2.09□□□□□ -2.07
RPA3P35244 SUB1P1-201ENST00000524415 382 ntBASIC2.09□□□□□ -2.07
RPA3P35244 CYB5AP5-201ENST00000549779 389 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC091544.4-201ENST00000555268 342 ntBASIC2.09□□□□□ -2.07
RPA3P35244 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.09□□□□□ -2.07
RPA3P35244 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 AL445435.1-201ENST00000604232 665 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 AL603758.1-201ENST00000618654 241 ntBASIC2.09□□□□□ -2.07
RPA3P35244 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.09□□□□□ -2.07
RPA3P35244 AC068057.2-201ENST00000624047 895 ntBASIC2.09□□□□□ -2.07
RPA3P35244 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RPA3P35244 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RPA3P35244 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
RPA3P35244 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPA3P35244 RNU6-216P-201ENST00000363282 104 ntBASIC2.08□□□□□ -2.08
RPA3P35244 RNU5E-8P-201ENST00000363502 116 ntBASIC2.08□□□□□ -2.08
RPA3P35244 RNU6-217P-201ENST00000384164 104 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
RPA3P35244 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.08□□□□□ -2.08
RPA3P35244 AL139421.1-201ENST00000423010 169 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC092634.2-201ENST00000428146 1010 ntBASIC2.08□□□□□ -2.08
RPA3P35244 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC007919.1-201ENST00000429380 217 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.08□□□□□ -2.08
RPA3P35244 Z82210.1-201ENST00000440037 231 ntBASIC2.08□□□□□ -2.08
RPA3P35244 SDCBPP1-201ENST00000440192 890 ntBASIC2.08□□□□□ -2.08
RPA3P35244 PIGFP3-201ENST00000441918 722 ntBASIC2.08□□□□□ -2.08
RPA3P35244 CBWD4P-201ENST00000445695 655 ntBASIC2.08□□□□□ -2.08
RPA3P35244 COX6CP12-201ENST00000446748 202 ntBASIC2.08□□□□□ -2.08
RPA3P35244 MRPS17P3-201ENST00000465453 385 ntBASIC2.08□□□□□ -2.08
RPA3P35244 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 AC114786.4-201ENST00000508771 728 ntBASIC2.08□□□□□ -2.08
RPA3P35244 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC114797.1-201ENST00000514003 728 ntBASIC2.08□□□□□ -2.08
RPA3P35244 SNORA31.18-201ENST00000517043 134 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC022634.1-201ENST00000520765 532 ntBASIC2.08□□□□□ -2.08
RPA3P35244 HSPA8P13-201ENST00000523715 472 ntBASIC2.08□□□□□ -2.08
RPA3P35244 OR8K2P-201ENST00000524645 927 ntBASIC2.08□□□□□ -2.08
RPA3P35244 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.08□□□□□ -2.08
RPA3P35244 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 RPS3AP23-202ENST00000574601 686 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC005951.2-201ENST00000576282 495 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.08□□□□□ -2.08
RPA3P35244 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
RPA3P35244 AL390208.1-201ENST00000605885 644 ntBASIC2.08□□□□□ -2.08
RPA3P35244 AL158211.4-201ENST00000606988 584 ntBASIC2.08□□□□□ -2.08
RPA3P35244 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
RPA3P35244 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 CU459211.1-201ENST00000635667 749 ntBASIC2.08□□□□□ -2.08
RPA3P35244 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPA3P35244 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
RPA3P35244 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPA3P35244 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPA3P35244 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPA3P35244 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPA3P35244 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms