Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC093783.1-201ENST00000612976 329 ntBASIC2□□□□□ -2.09
COL5A1P20908 AP002791.1-201ENST00000623291 381 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC079248.2-201ENST00000623779 326 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC017037.3-201ENST00000625016 472 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC092608.3-201ENST00000625017 386 ntBASIC2□□□□□ -2.09
COL5A1P20908 ELL2P3-201ENST00000457883 1602 ntBASIC2□□□□□ -2.09
COL5A1P20908 SGO1P1-201ENST00000603525 1447 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 Y_RNA.465-201ENST00000384293 102 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 SNORA40.2-201ENST00000390847 128 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC090960.1-201ENST00000421072 306 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 OR4K11P-201ENST00000431829 904 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 MTND1P32-201ENST00000433043 938 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AL445567.1-201ENST00000439121 144 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 USP9YP8-201ENST00000441913 500 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AL360221.1-201ENST00000445989 335 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 AL445669.2-201ENST00000454425 421 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC104308.1-201ENST00000454621 333 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 PNPLA4P1-201ENST00000458328 305 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC118282.2-201ENST00000508739 374 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 IGJP1-201ENST00000522682 475 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.99□□□□□ -2.09
COL5A1P20908 ZNF321P-202ENST00000550843 495 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC008015.1-201ENST00000555505 465 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 DUXAP1-201ENST00000556632 463 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.99□□□□□ -2.09
COL5A1P20908 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AP001542.2-201ENST00000593141 364 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.99□□□□□ -2.09
COL5A1P20908 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.99□□□□□ -2.09
COL5A1P20908 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AF246928.1-201ENST00000623768 87 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 AP003072.4-201ENST00000624580 310 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
COL5A1P20908 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.99□□□□□ -2.09
COL5A1P20908 AC026241.1-201ENST00000517873 2142 ntBASIC1.99□□□□□ -2.09
COL5A1P20908 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL5A1P20908 AC027514.1-201ENST00000588561 1603 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 RNU6-251P-201ENST00000363235 104 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 RNU6-1066P-201ENST00000363573 105 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 RNU6-413P-201ENST00000384115 107 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 MIR16-1-201ENST00000385271 89 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 AL079342.2-201ENST00000403367 482 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 AF274854.1-201ENST00000413236 615 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 DPRXP1-201ENST00000426312 460 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC234781.2-201ENST00000426370 994 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 COX7BP2-201ENST00000437976 242 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC027673.1-201ENST00000456245 405 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 RPL30P6-201ENST00000475925 342 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC108734.3-201ENST00000481241 1165 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 RPF2P2-201ENST00000504693 896 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 TTC39CP1-201ENST00000512513 755 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 DUXAP5-201ENST00000529668 529 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 BNIP3P26-201ENST00000600827 554 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC064807.4-201ENST00000607201 407 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 AC131902.3-201ENST00000611767 581 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC005332.6-201ENST00000613178 446 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AL512506.2-201ENST00000624472 458 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms