Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC023632.1-201ENST00000518463 375 ntBASIC2.32□□□□□ -2.04
TPM1P09493 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.32□□□□□ -2.04
TPM1P09493 AP000403.1-201ENST00000603349 851 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC011451.2-201ENST00000604303 598 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AL158211.4-201ENST00000606988 584 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AL589743.7-201ENST00000612637 233 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AL161423.1-201ENST00000613700 262 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AL603758.1-201ENST00000618654 241 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC084824.4-201ENST00000620106 731 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC025034.2-201ENST00000623264 286 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC073592.7-201ENST00000623659 507 ntBASIC2.32□□□□□ -2.04
TPM1P09493 MTND1P37-201ENST00000636562 264 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC087821.2-201ENST00000637086 450 ntBASIC2.32□□□□□ -2.04
TPM1P09493 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 RNU5E-8P-201ENST00000363502 116 ntBASIC2.31□□□□□ -2.04
TPM1P09493 RNU6-884P-201ENST00000363889 107 ntBASIC2.31□□□□□ -2.04
TPM1P09493 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC096664.2-201ENST00000411843 406 ntBASIC2.31□□□□□ -2.04
TPM1P09493 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.31□□□□□ -2.04
TPM1P09493 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM1P09493 SEPT14P24-201ENST00000447236 180 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM1P09493 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AL121769.1-201ENST00000469473 401 ntBASIC2.31□□□□□ -2.04
TPM1P09493 RPS20P22-201ENST00000473700 357 ntBASIC2.31□□□□□ -2.04
TPM1P09493 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.31□□□□□ -2.04
TPM1P09493 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM1P09493 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
TPM1P09493 OR5AQ1P-201ENST00000527596 927 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AP001646.1-201ENST00000527936 915 ntBASIC2.31□□□□□ -2.04
TPM1P09493 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TPM1P09493 AC027176.1-201ENST00000560204 514 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.31□□□□□ -2.04
TPM1P09493 MIR4637-201ENST00000582405 84 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.31□□□□□ -2.04
TPM1P09493 AC008121.1-201ENST00000603244 268 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC136601.2-201ENST00000604356 474 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AL021997.1-201ENST00000605757 193 ntBASIC2.31□□□□□ -2.04
TPM1P09493 MIR8084-201ENST00000614105 89 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AL590099.1-201ENST00000615276 138 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AP003485.2-201ENST00000623636 610 ntBASIC2.31□□□□□ -2.04
TPM1P09493 AC005539.1-201ENST00000443768 1479 ntBASIC2.31□□□□□ -2.04
TPM1P09493 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
TPM1P09493 RNA5SP160-201ENST00000364866 120 ntBASIC2.3□□□□□ -2.04
TPM1P09493 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM1P09493 EIF4EP4-201ENST00000424916 578 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.3□□□□□ -2.04
TPM1P09493 MED14P1-201ENST00000430517 648 ntBASIC2.3□□□□□ -2.04
TPM1P09493 MTCYBP15-201ENST00000433123 1127 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AL591719.1-201ENST00000444669 744 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AL118520.1-201ENST00000450770 291 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.3□□□□□ -2.04
TPM1P09493 RPL12P25-201ENST00000455592 494 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM1P09493 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
TPM1P09493 MTCO2P9-201ENST00000503214 694 ntBASIC2.3□□□□□ -2.04
TPM1P09493 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM1P09493 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 AC118465.1-201ENST00000513820 1271 ntBASIC2.3□□□□□ -2.04
TPM1P09493 SCARNA3-201ENST00000517097 143 ntBASIC2.3□□□□□ -2.04
TPM1P09493 RNU6-1261P-201ENST00000517194 104 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AP001189.2-201ENST00000527320 189 ntBASIC2.3□□□□□ -2.04
TPM1P09493 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TPM1P09493 AC044913.1-201ENST00000557200 430 ntBASIC2.3□□□□□ -2.04
TPM1P09493 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM1P09493 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.3□□□□□ -2.04
TPM1P09493 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 AC007938.3-201ENST00000604965 623 ntBASIC2.3□□□□□ -2.04
TPM1P09493 AL033523.1-201ENST00000605153 153 ntBASIC2.3□□□□□ -2.04
TPM1P09493 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.3□□□□□ -2.04
TPM1P09493 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 AC097460.3-201ENST00000623099 442 ntBASIC2.3□□□□□ -2.04
TPM1P09493 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TPM1P09493 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TPM1P09493 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.3□□□□□ -2.04
TPM1P09493 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TPM1P09493 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.29□□□□□ -2.04
TPM1P09493 SNORA5B-201ENST00000363786 132 ntBASIC2.29□□□□□ -2.04
TPM1P09493 NDUFB4P4-201ENST00000404822 243 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AL357078.2-201ENST00000416486 427 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM1P09493 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.29□□□□□ -2.04
TPM1P09493 SDCBPP1-201ENST00000440192 890 ntBASIC2.29□□□□□ -2.04
TPM1P09493 GPM6BP3-201ENST00000442797 145 ntBASIC2.29□□□□□ -2.04
TPM1P09493 MRPL42P4-201ENST00000453267 443 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC008379.1-201ENST00000463655 464 ntBASIC2.29□□□□□ -2.04
TPM1P09493 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.29□□□□□ -2.04
TPM1P09493 AC121161.1-201ENST00000510606 652 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms