Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RB1P06400 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
RB1P06400 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
RB1P06400 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 AC000403.1-201ENST00000613696 3585 ntBASIC3.43□□□□□ -1.86
RB1P06400 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
RB1P06400 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 RNU4-91P-201ENST00000364778 135 ntBASIC3.43□□□□□ -1.86
RB1P06400 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.43□□□□□ -1.86
RB1P06400 AL354719.1-201ENST00000406535 843 ntBASIC3.43□□□□□ -1.86
RB1P06400 Y_RNA.598-201ENST00000410480 95 ntBASIC3.43□□□□□ -1.86
RB1P06400 RN7SKP284-201ENST00000411002 343 ntBASIC3.43□□□□□ -1.86
RB1P06400 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC126124.2-201ENST00000413542 321 ntBASIC3.43□□□□□ -1.86
RB1P06400 RPS7P13-201ENST00000413955 498 ntBASIC3.43□□□□□ -1.86
RB1P06400 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.43□□□□□ -1.86
RB1P06400 AL590383.1-201ENST00000428602 75 ntBASIC3.43□□□□□ -1.86
RB1P06400 MTND1P28-201ENST00000435623 950 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.43□□□□□ -1.86
RB1P06400 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.43□□□□□ -1.86
RB1P06400 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.43□□□□□ -1.86
RB1P06400 AC009961.3-201ENST00000449832 765 ntBASIC3.43□□□□□ -1.86
RB1P06400 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AC004801.2-202ENST00000463559 283 ntBASIC3.43□□□□□ -1.86
RB1P06400 RNU6-1256P-201ENST00000516539 103 ntBASIC3.43□□□□□ -1.86
RB1P06400 RNU6-711P-201ENST00000517255 106 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RB1P06400 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AC124947.2-202ENST00000552735 133 ntBASIC3.43□□□□□ -1.86
RB1P06400 AL157394.1-201ENST00000562983 1224 ntBASIC3.43□□□□□ -1.86
RB1P06400 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 AC010620.1-201ENST00000601088 1102 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC008962.1-201ENST00000605729 304 ntBASIC3.43□□□□□ -1.86
RB1P06400 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AC025594.3-201ENST00000613068 790 ntBASIC3.43□□□□□ -1.86
RB1P06400 AL158063.1-201ENST00000615349 536 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC002076.2-201ENST00000617362 122 ntBASIC3.43□□□□□ -1.86
RB1P06400 Z69908.1-201ENST00000622603 247 ntBASIC3.43□□□□□ -1.86
RB1P06400 AC110801.1-201ENST00000623590 212 ntBASIC3.43□□□□□ -1.86
RB1P06400 AL136313.1-201ENST00000624804 202 ntBASIC3.43□□□□□ -1.86
RB1P06400 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.43□□□□□ -1.86
RB1P06400 AC099654.13-201ENST00000639774 207 ntBASIC3.43□□□□□ -1.86
RB1P06400 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.43□□□□□ -1.86
RB1P06400 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RB1P06400 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
RB1P06400 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RB1P06400 OR1S2-201ENST00000302592 978 ntBASIC3.42□□□□□ -1.86
RB1P06400 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RB1P06400 FGF7P2-201ENST00000332473 296 ntBASIC3.42□□□□□ -1.86
RB1P06400 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RB1P06400 SNORA71.1-201ENST00000364523 117 ntBASIC3.42□□□□□ -1.86
RB1P06400 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.42□□□□□ -1.86
RB1P06400 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
RB1P06400 RNY3P10-201ENST00000384764 102 ntBASIC3.42□□□□□ -1.86
RB1P06400 RNU6-1197P-201ENST00000391183 107 ntBASIC3.42□□□□□ -1.86
RB1P06400 FAT1P1-201ENST00000406588 507 ntBASIC3.42□□□□□ -1.86
RB1P06400 FCF1P10-201ENST00000407590 479 ntBASIC3.42□□□□□ -1.86
RB1P06400 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
RB1P06400 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
RB1P06400 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.42□□□□□ -1.86
RB1P06400 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.42□□□□□ -1.86
RB1P06400 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.42□□□□□ -1.86
RB1P06400 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
RB1P06400 TAF9P1-201ENST00000445421 515 ntBASIC3.42□□□□□ -1.86
RB1P06400 TAF9P2-201ENST00000454958 515 ntBASIC3.42□□□□□ -1.86
RB1P06400 RNA5SP269-201ENST00000459032 137 ntBASIC3.42□□□□□ -1.86
RB1P06400 RPS20P20-201ENST00000460498 340 ntBASIC3.42□□□□□ -1.86
RB1P06400 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.42□□□□□ -1.86
RB1P06400 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.42□□□□□ -1.86
RB1P06400 PCBP2P3-201ENST00000509726 843 ntBASIC3.42□□□□□ -1.86
RB1P06400 AP003467.2-201ENST00000520175 319 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC100870.1-201ENST00000522035 505 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC107934.1-201ENST00000522215 217 ntBASIC3.42□□□□□ -1.86
RB1P06400 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.42□□□□□ -1.86
RB1P06400 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.42□□□□□ -1.86
RB1P06400 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.42□□□□□ -1.86
RB1P06400 MIR3162-201ENST00000581818 82 ntBASIC3.42□□□□□ -1.86
RB1P06400 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.42□□□□□ -1.86
RB1P06400 UBL5P2-201ENST00000583788 219 ntBASIC3.42□□□□□ -1.86
RB1P06400 MIR4293-201ENST00000584305 78 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC013553.2-201ENST00000604244 589 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.42□□□□□ -1.86
RB1P06400 AC239868.4-201ENST00000608318 671 ntBASIC3.42□□□□□ -1.86
RB1P06400 BX664608.1-201ENST00000610519 487 ntBASIC3.42□□□□□ -1.86
RB1P06400 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.42□□□□□ -1.86
RB1P06400 uc_338.12-201ENST00000616344 181 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC068831.7-201ENST00000616954 363 ntBASIC3.42□□□□□ -1.86
RB1P06400 SNHG22-203ENST00000617833 660 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC091953.2-201ENST00000623979 160 ntBASIC3.42□□□□□ -1.86
RB1P06400 AC092104.1-201ENST00000497346 1441 ntBASIC3.42□□□□□ -1.86
RB1P06400 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
RB1P06400 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 567.7 ms