Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC025165.5-201ENST00000602802 578 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.6-201ENST00000603753 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.11-201ENST00000604059 253 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.10-201ENST00000604330 253 ntBASIC1.46□□□□□ -2.18
TNFP01375 AC002487.1-201ENST00000604565 994 ntBASIC1.46□□□□□ -2.18
TNFP01375 AC008162.1-201ENST00000604718 254 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.1-201ENST00000604752 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL355297.2-201ENST00000604792 129 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.2-201ENST00000604983 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.5-201ENST00000605253 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.4-201ENST00000605279 254 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.12-201ENST00000605291 253 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.8-201ENST00000605353 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.9-201ENST00000605428 253 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL670379.7-201ENST00000605823 252 ntBASIC1.46□□□□□ -2.18
TNFP01375 AC005296.1-201ENST00000616145 209 ntBASIC1.46□□□□□ -2.18
TNFP01375 AL353748.2-201ENST00000622148 471 ntBASIC1.46□□□□□ -2.18
TNFP01375 TPTE2P4-201ENST00000258589 1605 ntBASIC1.46□□□□□ -2.18
TNFP01375 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 RNU4-51P-201ENST00000364206 140 ntBASIC1.45□□□□□ -2.18
TNFP01375 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TNFP01375 AL035405.1-201ENST00000400795 710 ntBASIC1.45□□□□□ -2.18
TNFP01375 SSXP10-201ENST00000402595 565 ntBASIC1.45□□□□□ -2.18
TNFP01375 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 Z82205.1-201ENST00000428456 297 ntBASIC1.45□□□□□ -2.18
TNFP01375 RPL36P19-201ENST00000430744 301 ntBASIC1.45□□□□□ -2.18
TNFP01375 AC092573.2-201ENST00000434546 243 ntBASIC1.45□□□□□ -2.18
TNFP01375 AC092473.1-201ENST00000441098 221 ntBASIC1.45□□□□□ -2.18
TNFP01375 RPS29P20-201ENST00000489592 171 ntBASIC1.45□□□□□ -2.18
TNFP01375 RPS15AP36-201ENST00000492022 382 ntBASIC1.45□□□□□ -2.18
TNFP01375 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.45□□□□□ -2.18
TNFP01375 AP005435.4-201ENST00000529514 284 ntBASIC1.45□□□□□ -2.18
TNFP01375 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 AL161670.1-201ENST00000554348 137 ntBASIC1.45□□□□□ -2.18
TNFP01375 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TNFP01375 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TNFP01375 AC098679.5-201ENST00000624394 571 ntBASIC1.45□□□□□ -2.18
TNFP01375 AC004520.1-201ENST00000608362 1413 ntBASIC1.45□□□□□ -2.18
TNFP01375 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
TNFP01375 NUP58P1-201ENST00000502546 1738 ntBASIC1.44□□□□□ -2.18
TNFP01375 Y_RNA.164-201ENST00000363709 102 ntBASIC1.44□□□□□ -2.18
TNFP01375 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
TNFP01375 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TNFP01375 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFP01375 RPS20P15-201ENST00000412792 311 ntBASIC1.44□□□□□ -2.18
TNFP01375 AL353729.1-201ENST00000425044 720 ntBASIC1.44□□□□□ -2.18
TNFP01375 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TNFP01375 AL512661.1-201ENST00000434586 1253 ntBASIC1.44□□□□□ -2.18
TNFP01375 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFP01375 AC113398.2-201ENST00000507630 558 ntBASIC1.44□□□□□ -2.18
TNFP01375 TRMT112P2-201ENST00000512910 132 ntBASIC1.44□□□□□ -2.18
TNFP01375 SNORA70.16-201ENST00000516390 95 ntBASIC1.44□□□□□ -2.18
TNFP01375 RNU2-19P-201ENST00000517288 84 ntBASIC1.44□□□□□ -2.18
TNFP01375 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFP01375 CASP1P1-201ENST00000526345 212 ntBASIC1.44□□□□□ -2.18
TNFP01375 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.44□□□□□ -2.18
TNFP01375 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.44□□□□□ -2.18
TNFP01375 AC078899.2-201ENST00000595282 212 ntBASIC1.44□□□□□ -2.18
TNFP01375 AL359821.1-201ENST00000605519 182 ntBASIC1.44□□□□□ -2.18
TNFP01375 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
TNFP01375 MTND4P8-201ENST00000514997 1362 ntBASIC1.44□□□□□ -2.18
TNFP01375 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFP01375 AL391987.6-201ENST00000305671 199 ntBASIC1.43□□□□□ -2.18
TNFP01375 Y_RNA.4-201ENST00000362333 112 ntBASIC1.43□□□□□ -2.18
TNFP01375 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC099677.1-201ENST00000420575 175 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC009237.2-201ENST00000421358 284 ntBASIC1.43□□□□□ -2.18
TNFP01375 IFNA20P-201ENST00000436840 528 ntBASIC1.43□□□□□ -2.18
TNFP01375 SNRPGP13-201ENST00000442212 177 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC140059.1-201ENST00000489238 361 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC034222.1-201ENST00000494052 532 ntBASIC1.43□□□□□ -2.18
TNFP01375 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFP01375 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.43□□□□□ -2.18
TNFP01375 Y_RNA.676-201ENST00000516393 96 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFP01375 AC008676.3-201ENST00000521237 435 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.43□□□□□ -2.18
TNFP01375 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFP01375 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFP01375 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.43□□□□□ -2.18
TNFP01375 HMGB1P14-201ENST00000557424 591 ntBASIC1.43□□□□□ -2.18
TNFP01375 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.43□□□□□ -2.18
TNFP01375 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFP01375 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
TNFP01375 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.43□□□□□ -2.18
TNFP01375 AC025588.2-201ENST00000604851 466 ntBASIC1.43□□□□□ -2.18
TNFP01375 RMST_6.1-201ENST00000611980 203 ntBASIC1.43□□□□□ -2.18
TNFP01375 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.43□□□□□ -2.18
TNFP01375 AL390862.1-201ENST00000635467 1469 ntBASIC1.43□□□□□ -2.18
TNFP01375 U8.1-201ENST00000362843 134 ntBASIC1.42□□□□□ -2.18
TNFP01375 RNU6-173P-201ENST00000364215 104 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms