Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 U2.11-201ENST00000616345 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.2-201ENST00000616535 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.3-201ENST00000617785 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.19-201ENST00000618602 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RNU2-1-201ENST00000618664 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.6-201ENST00000619225 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC010378.1-201ENST00000619270 362 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.5-201ENST00000619465 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.10-201ENST00000620268 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC009487.4-201ENST00000624969 3585 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AP000776.1-201ENST00000530032 1663 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTDNEP1O95476 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 GDI2P1-201ENST00000429312 1336 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTDNEP1O95476 MTND4P35-201ENST00000604257 1375 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 RNU6-173P-201ENST00000364215 104 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 MIR627-201ENST00000384979 97 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 MIR493-201ENST00000385254 89 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 PSMA6P3-201ENST00000428242 164 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC236972.1-201ENST00000433225 199 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 AL359385.1-201ENST00000456509 365 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 snoU109.4-201ENST00000458953 143 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC108729.1-201ENST00000487812 947 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 CBX3P3-201ENST00000508108 532 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 OR4P1P-201ENST00000530808 1136 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 EEF1B2P4-201ENST00000551398 348 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 MTND1P24-201ENST00000552175 861 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 HSPE1P3-201ENST00000559254 309 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC009063.1-201ENST00000563342 702 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CTDNEP1O95476 ISCA1P3-201ENST00000577104 373 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 OR4K7P-201ENST00000580232 945 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC022662.1-201ENST00000580252 331 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 BNIP3P24-201ENST00000593398 557 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC007349.4-201ENST00000608114 532 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 AC109809.1-201ENST00000619665 545 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTDNEP1O95476 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CTDNEP1O95476 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.42□□□□□ -2.02
CTDNEP1O95476 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.42□□□□□ -2.02
CTDNEP1O95476 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 ZNF876P-202ENST00000398732 1485 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CTDNEP1O95476 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 RNU6-343P-201ENST00000364709 104 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 RNU1-91P-201ENST00000364746 163 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 Y_RNA.548-201ENST00000384656 105 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC007742.1-201ENST00000425789 329 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 ELOCP26-201ENST00000436067 329 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 RNU6-717P-201ENST00000459076 104 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC010625.1-201ENST00000511296 403 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC008413.1-201ENST00000511864 177 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.41□□□□□ -2.02
CTDNEP1O95476 HSPE1P7-201ENST00000604681 321 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC034229.4-201ENST00000607861 441 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC243773.3-201ENST00000613270 256 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL139418.1-201ENST00000613613 177 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AC025588.4-201ENST00000615802 908 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 AL353748.2-201ENST00000622148 471 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 ZNF519P1-201ENST00000449011 1626 ntBASIC2.41□□□□□ -2.02
CTDNEP1O95476 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CTDNEP1O95476 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CTDNEP1O95476 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CTDNEP1O95476 Y_RNA.311-201ENST00000365068 96 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AL136372.1-201ENST00000403060 228 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 SNORA11.4-201ENST00000408823 129 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RN7SKP32-201ENST00000410167 303 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RNU6-757P-201ENST00000410334 100 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 EZH2P1-201ENST00000431167 291 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms