Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MTND1P31-201ENST00000449206 961 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 AL109933.2-201ENST00000452651 260 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 RPS20P22-201ENST00000473700 357 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 RPS15AP34-201ENST00000487776 387 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 RNU6-276P-201ENST00000516114 96 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 SNORA19.3-201ENST00000516165 130 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 RNA5SP282-201ENST00000516355 108 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 HMGN1P28-201ENST00000521340 364 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.41□□□□□ -2.02
CLOCKO15516 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.41□□□□□ -2.02
CLOCKO15516 MIR4298-201ENST00000584380 73 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 HMGN2P15-201ENST00000585707 270 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.41□□□□□ -2.02
CLOCKO15516 NRBF2P5-201ENST00000603087 788 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 AC245517.5-201ENST00000611529 162 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 IGHVIII-44-202ENST00000636235 289 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 CCT4P2-201ENST00000233836 1548 ntBASIC2.41□□□□□ -2.02
CLOCKO15516 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLOCKO15516 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLOCKO15516 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLOCKO15516 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.02
CLOCKO15516 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.4□□□□□ -2.03
CLOCKO15516 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLOCKO15516 RNU6-859P-201ENST00000362728 107 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RNU6-461P-201ENST00000364195 107 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RNU1-112P-201ENST00000364401 164 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.4□□□□□ -2.03
CLOCKO15516 RNU1-39P-201ENST00000383897 165 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RNU6-140P-201ENST00000384566 108 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RNU6-114P-201ENST00000384704 105 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLOCKO15516 RNU2-33P-201ENST00000410344 192 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RNU6-516P-201ENST00000411381 104 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 MTND1P23-201ENST00000416931 372 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.4□□□□□ -2.03
CLOCKO15516 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
CLOCKO15516 USP9YP11-201ENST00000427537 717 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.4□□□□□ -2.03
CLOCKO15516 AC108938.1-201ENST00000451204 136 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
CLOCKO15516 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.4□□□□□ -2.03
CLOCKO15516 MRPS17P3-201ENST00000465453 385 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.4□□□□□ -2.03
CLOCKO15516 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
CLOCKO15516 AC034159.1-201ENST00000513885 583 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC022634.1-201ENST00000520765 532 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC007115.1-201ENST00000546853 234 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.4□□□□□ -2.03
CLOCKO15516 MIR3162-201ENST00000581818 82 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
CLOCKO15516 FTX_3.1-201ENST00000610451 147 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC034102.8-201ENST00000615146 484 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AL121895.2-201ENST00000619558 447 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 AC019226.1-201ENST00000625666 515 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.4□□□□□ -2.03
CLOCKO15516 AC011477.1-204ENST00000623416 1325 ntBASIC2.4□□□□□ -2.03
CLOCKO15516 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLOCKO15516 AL359693.1-201ENST00000614959 2407 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLOCKO15516 AC092447.10-201ENST00000620607 1652 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 RPL23AP29-201ENST00000397284 453 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLOCKO15516 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.39□□□□□ -2.03
CLOCKO15516 AL953862.1-201ENST00000423016 168 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.39□□□□□ -2.03
CLOCKO15516 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.39□□□□□ -2.03
CLOCKO15516 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLOCKO15516 AC126389.1-201ENST00000477436 290 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC021451.1-201ENST00000523498 1129 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 COX6CP5-201ENST00000527162 228 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 OR4K7P-201ENST00000580232 945 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AC026790.2-201ENST00000606282 430 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.39□□□□□ -2.03
CLOCKO15516 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.39□□□□□ -2.03
CLOCKO15516 PART1_2.1-201ENST00000612397 250 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 AC106858.1-201ENST00000637497 429 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLOCKO15516 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
CLOCKO15516 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLOCKO15516 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.39□□□□□ -2.03
CLOCKO15516 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
CLOCKO15516 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms