Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC073264.1-201ENST00000411508 416 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC004941.2-201ENST00000427009 228 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC027673.1-201ENST00000456245 405 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 RNU6-498P-201ENST00000459468 107 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC067942.3-201ENST00000512025 362 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 SNORA31.20-201ENST00000517111 133 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.15□□□□□ -2.23
CACNA1AO00555 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.15□□□□□ -2.23
CACNA1AO00555 FAM106CP-201ENST00000582212 507 ntBASIC1.15□□□□□ -2.23
CACNA1AO00555 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1AO00555 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1AO00555 RNU1-148P-201ENST00000384472 162 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 RPS15AP34-201ENST00000487776 387 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AL049779.4-201ENST00000604500 156 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 RPL21P136-201ENST00000605378 396 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AL590099.1-201ENST00000615276 138 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AC048347.1-201ENST00000624621 427 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1AO00555 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1AO00555 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CACNA1AO00555 RNA5SP465-201ENST00000391195 109 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 RPL17P12-201ENST00000413391 526 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AC009961.3-201ENST00000449832 765 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AC024619.4-201ENST00000580924 316 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.14□□□□□ -2.23
CACNA1AO00555 SNHG22-203ENST00000617833 660 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AC024595.1-201ENST00000623088 387 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 AL356118.1-201ENST00000635272 1078 ntBASIC1.14□□□□□ -2.23
CACNA1AO00555 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CACNA1AO00555 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.13□□□□□ -2.23
CACNA1AO00555 OR51A5P-201ENST00000415429 942 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC114973.1-201ENST00000429057 632 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC008427.1-201ENST00000503102 655 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC098799.2-201ENST00000509466 868 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 RPS27AP18-201ENST00000515536 459 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 SNORA14.1-201ENST00000516113 141 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.13□□□□□ -2.23
CACNA1AO00555 AL159169.2-201ENST00000610061 1269 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC011890.2-201ENST00000613393 294 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC022079.2-201ENST00000619739 566 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.13□□□□□ -2.23
CACNA1AO00555 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.13□□□□□ -2.23
CACNA1AO00555 MIRLET7G-201ENST00000362280 84 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 Y_RNA.65-201ENST00000362846 100 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 U8.9-201ENST00000365667 134 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.13□□□□□ -2.23
CACNA1AO00555 AL606489.2-201ENST00000433886 234 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 MTCO2P9-201ENST00000503214 694 ntBASIC1.13□□□□□ -2.23
CACNA1AO00555 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.13□□□□□ -2.23
CACNA1AO00555 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CACNA1AO00555 RNU6-603P-201ENST00000411403 107 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.12□□□□□ -2.23
CACNA1AO00555 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.12□□□□□ -2.23
CACNA1AO00555 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.12□□□□□ -2.23
CACNA1AO00555 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AC103710.4-201ENST00000609301 899 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 AC009452.1-201ENST00000640823 606 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CACNA1AO00555 AL161722.3-201ENST00000605789 2983 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 RNY4P7-201ENST00000364600 96 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AC096751.1-202ENST00000502691 1067 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 AC093281.2-201ENST00000510153 597 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AC007834.2-201ENST00000536310 343 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.12□□□□□ -2.23
CACNA1AO00555 AL512605.2-201ENST00000592972 256 ntBASIC1.12□□□□□ -2.23
CACNA1AO00555 AC011477.1-204ENST00000623416 1325 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.11□□□□□ -2.23
CACNA1AO00555 RNU6-452P-201ENST00000384406 107 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 RNA5SP489-201ENST00000410986 109 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.11□□□□□ -2.23
CACNA1AO00555 EIF4A1P12-201ENST00000551910 141 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 MTCO1P40-201ENST00000574371 625 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 MIR4714-201ENST00000580728 77 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.11□□□□□ -2.23
CACNA1AO00555 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.11□□□□□ -2.23
CACNA1AO00555 RNU6-185P-201ENST00000384421 107 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.11□□□□□ -2.23
CACNA1AO00555 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.11□□□□□ -2.23
CACNA1AO00555 AC092902.1-201ENST00000486999 259 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.11□□□□□ -2.23
CACNA1AO00555 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.11□□□□□ -2.23
CACNA1AO00555 AC034102.8-201ENST00000615146 484 ntBASIC1.11□□□□□ -2.23
CACNA1AO00555 SNORA36.1-201ENST00000363424 132 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.1□□□□□ -2.23
CACNA1AO00555 RPS29P20-201ENST00000489592 171 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 SNORA3.4-201ENST00000515969 96 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 RNA5SP309-201ENST00000516670 106 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.1□□□□□ -2.23
CACNA1AO00555 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.1□□□□□ -2.23
CACNA1AO00555 MIR6835-201ENST00000621552 64 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AP000553.5-201ENST00000641933 54 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 Y_RNA.293-201ENST00000364908 93 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 SNRPEP2-201ENST00000397592 279 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 HMGN2P38-201ENST00000423806 265 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 WARS2P1-201ENST00000429678 537 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms