Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU4-62P-201ENST00000410125 130 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 TATDN1P1-201ENST00000414123 891 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC004383.1-201ENST00000438135 289 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC020699.1-201ENST00000505161 445 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGN4O00479 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGN4O00479 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGN4O00479 AC011611.5-201ENST00000552477 578 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGN4O00479 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 MIR4287-201ENST00000579398 78 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC011330.2-201ENST00000621680 635 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 AC068620.4-201ENST00000636730 1182 ntBASIC1.16□□□□□ -2.22
HMGN4O00479 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMGN4O00479 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGN4O00479 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMGN4O00479 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGN4O00479 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HMGN4O00479 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.15□□□□□ -2.22
HMGN4O00479 RNU4-74P-201ENST00000411280 161 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 EIF4EP4-201ENST00000424916 578 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMGN4O00479 AL356867.1-201ENST00000429623 299 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 RPL36P19-201ENST00000430744 301 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HMGN4O00479 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGN4O00479 HMGB1P31-201ENST00000437242 427 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 RPL23AP76-201ENST00000441860 458 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 MTCO1P42-201ENST00000457379 726 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 RN7SKP210-201ENST00000459176 261 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.15□□□□□ -2.23
HMGN4O00479 RNU4-18P-201ENST00000516751 149 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.15□□□□□ -2.23
HMGN4O00479 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGN4O00479 AL512598.1-201ENST00000610158 273 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AC005296.1-201ENST00000616145 209 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 AC073592.7-201ENST00000623659 507 ntBASIC1.15□□□□□ -2.23
HMGN4O00479 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMGN4O00479 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGN4O00479 RNU6-1159P-201ENST00000362933 107 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AL512604.1-201ENST00000404812 257 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 RNA5SP270-201ENST00000411361 118 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 USP9YP6-201ENST00000413550 854 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 HMGB1P49-201ENST00000418882 569 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGN4O00479 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGN4O00479 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGN4O00479 MTCO3P46-201ENST00000425787 232 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 MTND5P25-201ENST00000430499 799 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 Z85994.2-201ENST00000434327 452 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AC093155.1-201ENST00000440164 826 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGN4O00479 snoU13.23-201ENST00000458863 104 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGN4O00479 AC113398.2-201ENST00000507630 558 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGN4O00479 EIF4EP5-201ENST00000528228 640 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGN4O00479 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGN4O00479 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGN4O00479 AC078899.2-201ENST00000595282 212 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AC013468.1-201ENST00000608680 598 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 MTND2P41-201ENST00000637599 773 ntBASIC1.14□□□□□ -2.23
HMGN4O00479 AC080128.1-201ENST00000474389 1917 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGN4O00479 RNU6-270P-201ENST00000364131 105 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 RNU6-98P-201ENST00000384173 107 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HMGN4O00479 RNU6-821P-201ENST00000390995 107 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 SSXP10-201ENST00000402595 565 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AL136372.1-201ENST00000403060 228 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 SNORA11.2-201ENST00000408318 127 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGN4O00479 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.13□□□□□ -2.23
HMGN4O00479 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
HMGN4O00479 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.13□□□□□ -2.23
HMGN4O00479 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AL500527.1-201ENST00000448532 255 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.13□□□□□ -2.23
HMGN4O00479 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGN4O00479 RPL23AP3-201ENST00000453844 468 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 RNU7-95P-201ENST00000459222 64 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 DYNLL1P5-201ENST00000467158 270 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC107398.1-201ENST00000486904 505 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC068781.1-201ENST00000488231 618 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC055855.1-201ENST00000489563 579 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC026801.1-201ENST00000497178 464 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms