Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 ISCA1P2-201ENST00000438679 421 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 PIGFP3-201ENST00000441918 722 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 GAPDHP27-201ENST00000447427 1020 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 Z99127.3-201ENST00000448158 395 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC109925.1-201ENST00000478069 331 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC021205.2-201ENST00000480069 347 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 FABP5P5-201ENST00000515537 406 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC022878.1-201ENST00000530684 149 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 MIR4325-201ENST00000583049 90 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 DPPA3P3-201ENST00000603842 430 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC112191.3-201ENST00000604371 277 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AL359999.1-201ENST00000604513 294 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC239868.4-201ENST00000608318 671 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC107294.3-201ENST00000609211 526 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC006338.1-201ENST00000618453 749 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC025048.6-202ENST00000627667 438 ntBASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPIPA3F8WFD2 AC092104.1-201ENST00000497346 1441 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 U3.4-201ENST00000363352 213 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RNA5SP252-201ENST00000391131 119 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AL359634.1-202ENST00000404721 284 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 Y_RNA.598-201ENST00000410480 95 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 BTF3L4P3-201ENST00000418879 476 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RPS15AP12-201ENST00000419498 388 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC090960.1-201ENST00000421072 306 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 HMGB3P11-201ENST00000440127 604 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC140076.1-201ENST00000449897 361 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 SNRPGP6-201ENST00000451124 220 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 SNRPGP9-201ENST00000456025 225 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AL031183.1-201ENST00000457667 207 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RN7SL863P-201ENST00000462370 296 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC010401.1-201ENST00000463867 348 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 KC877373.1-201ENST00000479066 408 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AL135752.1-201ENST00000479477 471 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC006483.1-201ENST00000487308 313 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RNU6-928P-201ENST00000516876 104 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC011602.1-201ENST00000546484 331 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AP000860.1-201ENST00000605250 559 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RNU6-87P-201ENST00000607561 108 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC138749.5-201ENST00000611461 208 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC135507.2-201ENST00000612443 309 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC116165.2-201ENST00000616705 206 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AC058791.1-201ENST00000608412 3198 ntBASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.93□□□□□ -1.94
NPIPA3F8WFD2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 FAM35BP-202ENST00000497389 3337 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 OR1S2-201ENST00000302592 978 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RNU1-75P-201ENST00000347264 129 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 MIR422A-201ENST00000362286 90 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RNU1-70P-201ENST00000362618 164 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AP002088.1-201ENST00000382740 395 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RNU2-62P-201ENST00000410868 191 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC007899.1-201ENST00000412776 775 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC244035.1-201ENST00000430042 390 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RPL23AP69-201ENST00000431134 458 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 FCF1P1-201ENST00000432690 571 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 BX679664.1-201ENST00000434429 253 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms