Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNA5SP76-201ENST00000516277 87 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC010653.1-201ENST00000571108 881 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MIR4298-201ENST00000584380 73 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MIR4999-201ENST00000585029 91 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC004987.4-201ENST00000603383 338 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 BCRP9-201ENST00000605312 388 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC087683.2-201ENST00000611384 326 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MIR6076-201ENST00000617521 113 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC009159.2-201ENST00000617603 606 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MIR6130-201ENST00000619419 109 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AP003122.6-201ENST00000623831 495 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC017037.3-201ENST00000625016 472 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.65□□□□□ -1.98
SMIM28A0A1B0GU29 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SMIM28A0A1B0GU29 MTND4P16-201ENST00000466108 1367 ntBASIC2.65□□□□□ -1.98
SMIM28A0A1B0GU29 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.65□□□□□ -1.98
SMIM28A0A1B0GU29 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 SNORA14A-201ENST00000364773 135 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 RN7SKP266-201ENST00000410232 287 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 CCDC58P2-201ENST00000417131 366 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC011233.1-201ENST00000422812 283 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 MTND1P20-201ENST00000430341 950 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 YWHAZP7-201ENST00000436906 631 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 GAPDHP27-201ENST00000447427 1020 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 PAXBP1P1-201ENST00000449315 447 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC093392.2-201ENST00000450682 337 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 RNA5SP310-201ENST00000459084 116 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC104472.2-201ENST00000469035 601 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 RNA5SP216-201ENST00000516111 123 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 Y_RNA.717-201ENST00000517106 92 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC091544.4-201ENST00000555268 342 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC005951.2-201ENST00000576282 495 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC023043.3-201ENST00000593113 385 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC021171.1-201ENST00000603137 706 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC011451.2-201ENST00000604303 598 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC097468.3-201ENST00000607956 456 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC004067.1-201ENST00000608733 700 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AP000254.1-201ENST00000609934 520 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AL355816.2-201ENST00000610049 647 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AL603758.1-201ENST00000618654 241 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AL590808.1-201ENST00000618696 141 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 AC079597.1-201ENST00000624306 508 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 FAM35CP-201ENST00000554755 2470 ntBASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMIM28A0A1B0GU29 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 MAPK10-322ENST00000641485 4530 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-660P-201ENST00000364566 109 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 Y_RNA.302-201ENST00000364997 102 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 RNA5SP88-201ENST00000365560 109 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-76P-201ENST00000384060 104 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 NDUFB4P6-201ENST00000436819 366 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AL354941.1-201ENST00000438600 464 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 ST13P20-201ENST00000447996 1065 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC234775.1-201ENST00000454247 670 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 RPL30P14-201ENST00000482744 348 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC008413.1-201ENST00000511864 177 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC013828.2-201ENST00000532487 235 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 OR4H12P-201ENST00000556269 907 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 MIR544B-201ENST00000582372 78 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 BX664608.1-201ENST00000610519 487 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms