Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU5E-8P-201ENST00000363502 116 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 RNU6-328P-201ENST00000390887 106 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 SKINT1L-201ENST00000401057 817 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AC233728.2-201ENST00000425348 757 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 RPS6P15-201ENST00000431996 751 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 RSU1P2-202ENST00000437884 485 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 HMGB1P18-201ENST00000438801 619 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 RNU7-125P-201ENST00000458760 62 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AP001646.1-201ENST00000527936 915 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM4Q9ULL8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 RNU6-769P-201ENST00000384407 104 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 MIR764-201ENST00000390811 85 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 RNU6-278P-201ENST00000390945 109 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 FAT1P1-201ENST00000406588 507 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AL049714.1-201ENST00000466686 347 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 RPS3AP22-201ENST00000488297 769 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 HIGD1AP10-201ENST00000527837 282 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC145350.1-201ENST00000567426 208 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC068831.7-201ENST00000616954 363 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC002076.2-201ENST00000617362 122 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC241585.2-209ENST00000638217 143 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 MTND5P33-201ENST00000571250 1450 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC006378.2-201ENST00000623178 2476 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AC138915.3-201ENST00000562908 1389 ntBASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM4Q9ULL8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MIR493-201ENST00000385254 89 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 RNU6-482P-201ENST00000391068 107 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC245054.2-201ENST00000415639 319 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC092447.3-201ENST00000426027 686 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 HMGN2P20-201ENST00000437531 273 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MTND2P24-201ENST00000453434 806 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 RPL30P6-201ENST00000475925 342 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 RN7SL633P-201ENST00000488974 297 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC109464.2-201ENST00000510242 943 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MTND1P22-201ENST00000510572 951 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MRPS33P3-201ENST00000513456 322 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC026407.1-201ENST00000518369 204 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AL133271.1-201ENST00000538229 291 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 MTCYBP22-201ENST00000603788 447 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 CCT4P2-201ENST00000233836 1548 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC092125.1-201ENST00000562568 1995 ntBASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHROOM4Q9ULL8 AC091152.2-201ENST00000591628 2569 ntBASIC5.34□□□□□ -1.56
SHROOM4Q9ULL8 AC008264.2-201ENST00000610193 3731 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-500P-201ENST00000362349 107 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 SNORA46-201ENST00000384762 135 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 MIR592-201ENST00000384959 97 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 TXNP7-201ENST00000406296 293 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 RPL7P10-201ENST00000417407 739 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC008850.1-201ENST00000427546 362 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC092754.2-201ENST00000463506 460 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC012181.1-201ENST00000479895 423 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC135721.1-201ENST00000497954 479 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 RNA5SP282-201ENST00000516355 108 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 MIR4474-201ENST00000579189 78 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 TPMTP1-201ENST00000592307 737 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 AC009570.1-201ENST00000609599 745 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 MIR6076-201ENST00000617521 113 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 XIST_intron.1-201ENST00000619444 68 ntBASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHROOM4Q9ULL8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-660P-201ENST00000364566 109 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 HMGB3P23-201ENST00000414981 585 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms