Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 RPL21P13-201ENST00000488305 481 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC055855.1-201ENST00000489563 579 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 KLHL2P1-201ENST00000508691 521 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 NPM1P41-201ENST00000512920 831 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 SNORA18.6-201ENST00000516792 115 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL121603.1-201ENST00000553815 142 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL356432.3-201ENST00000568952 465 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 MIR2682-201ENST00000580305 110 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC011451.2-201ENST00000604303 598 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC012557.2-201ENST00000605919 418 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 Z99129.1-201ENST00000612510 255 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL589743.7-201ENST00000612637 233 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL159972.1-201ENST00000625150 448 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC011460.1-201ENST00000636268 1834 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC009902.3-201ENST00000606235 2172 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NDE1Q9NXR1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RNU6-1155P-201ENST00000363554 107 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RNU6-1078P-201ENST00000364522 103 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 SNORD115.1-201ENST00000391109 76 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RPL17P50-201ENST00000396131 546 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RNU6ATAC-201ENST00000408749 126 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 CYCSP19-201ENST00000411715 316 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 OR1AA1P-201ENST00000419597 916 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL137014.1-201ENST00000420490 1226 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL589872.1-201ENST00000426602 288 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 SAR1AP4-201ENST00000429225 591 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 UBE2V1P13-201ENST00000436983 439 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 snoU109.1-201ENST00000459339 135 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RPL7P15-201ENST00000461190 712 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC010285.1-201ENST00000470580 392 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 LARP1BP2-201ENST00000486594 519 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 RNU6-405P-201ENST00000516637 110 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 SNORA31.20-201ENST00000517111 133 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AP003467.2-201ENST00000520175 319 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC107934.1-201ENST00000522215 217 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AP003392.2-201ENST00000527269 208 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 BDH2P1-201ENST00000602288 736 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AP001429.1-201ENST00000602568 530 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC079089.3-201ENST00000603094 673 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC091805.2-201ENST00000603848 235 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL162713.1-201ENST00000604480 262 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL158211.4-201ENST00000606988 584 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 BX664608.1-201ENST00000610519 487 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 MIR6075-201ENST00000620782 95 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL353748.2-201ENST00000622148 471 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AL392088.2-201ENST00000637607 285 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 AC092447.7-201ENST00000422212 1621 ntBASIC2.96□□□□□ -1.94
NDE1Q9NXR1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NDE1Q9NXR1 ASNSP3-201ENST00000451989 1306 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 Z82195.2-201ENST00000612348 18351 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNY4P24-201ENST00000362735 96 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 U8.3-201ENST00000363321 132 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNY4P16-201ENST00000364768 94 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNU6-1074P-201ENST00000383995 104 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 MIR19A-201ENST00000384878 82 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 SNORA26.7-201ENST00000391288 122 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL590004.2-201ENST00000404787 371 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNU2-66P-201ENST00000410650 161 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RN7SKP159-201ENST00000410657 292 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RAD23BP2-201ENST00000416003 1207 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 BX295541.1-201ENST00000417774 250 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 ZNF885P-201ENST00000420174 1098 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC019097.1-201ENST00000424783 735 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL353777.1-201ENST00000425552 326 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 ISCA1P6-201ENST00000427740 390 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC073063.1-201ENST00000434352 607 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC234775.1-201ENST00000454247 670 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms