Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 snoU13.24-201ENST00000458998 104 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU6-333P-201ENST00000459117 107 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 MIR2053-201ENST00000459295 91 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 RN7SL826P-201ENST00000479724 288 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 RPL21P99-201ENST00000480369 423 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC104564.1-201ENST00000493028 407 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AL139099.1-201ENST00000497398 403 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 HSPD1P15-201ENST00000505573 1122 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC091885.1-201ENST00000506658 268 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 NDUFB5P1-201ENST00000508134 564 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC021146.1-201ENST00000511202 716 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 RN7SKP40-201ENST00000517211 242 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC009902.1-201ENST00000519351 183 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC103783.1-201ENST00000520506 373 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AP002404.1-201ENST00000532005 451 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS11Q9H270 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC022893.3-201ENST00000607665 437 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 OR10AB1P-201ENST00000609613 938 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC083806.3-201ENST00000614016 455 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 uc_338.32-201ENST00000615087 172 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC007485.1-201ENST00000616755 206 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 MIR6891-201ENST00000618788 93 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS11Q9H270 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC009902.3-201ENST00000606235 2172 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 Y_RNA.153-201ENST00000363615 91 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 Y_RNA.176-201ENST00000363815 109 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RNA5SP189-201ENST00000364920 115 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 Y_RNA.373-201ENST00000365600 103 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 Y_RNA.574-201ENST00000384766 95 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RNA5SP397-201ENST00000391323 118 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 BX323014.1-201ENST00000412876 237 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RAC1P3-201ENST00000416129 580 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS11Q9H270 RPL12P3-201ENST00000440080 396 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC104058.1-201ENST00000448028 297 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS11Q9H270 RPL35AP15-201ENST00000468042 339 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AC010285.1-201ENST00000470580 392 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AC006517.1-201ENST00000480485 328 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RPL31P13-201ENST00000484151 370 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC020593.1-201ENST00000507399 299 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 Y_RNA.668-201ENST00000516233 93 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AP001922.4-201ENST00000526967 290 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC109635.4-202ENST00000531666 412 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS11Q9H270 AC098848.2-201ENST00000588023 330 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 AC103858.2-201ENST00000621471 543 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 MIR6730-201ENST00000622213 67 ntBASIC4.34□□□□□ -1.71
VPS11Q9H270 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS11Q9H270 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS11Q9H270 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC018555.1-201ENST00000567548 1980 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 MTND5P10-201ENST00000603719 1809 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AC011460.1-201ENST00000636268 1834 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS11Q9H270 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS11Q9H270 AC032011.1-201ENST00000611703 1549 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 MFSD8-242ENST00000641690 4199 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 AL157777.2-201ENST00000258070 137 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 RPL32P3-201ENST00000359025 275 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 SNORA31-201ENST00000362607 130 ntBASIC4.33□□□□□ -1.72
VPS11Q9H270 Y_RNA.167-201ENST00000363735 109 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms