Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TPT1P14-201ENST00000448018 505 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 RPL23AP41-201ENST00000484754 458 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 RNU6-507P-201ENST00000516045 100 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 RNU6-798P-201ENST00000516912 103 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AL133271.1-201ENST00000538229 291 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AL121603.1-201ENST00000553815 142 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.65□□□□□ -1.83
CDT1Q9H211 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.65□□□□□ -1.83
CDT1Q9H211 SNRPGP15-201ENST00000600149 222 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 DUXAP4-201ENST00000603046 613 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AL158211.4-201ENST00000606988 584 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AL359314.1-201ENST00000616913 261 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AC005858.4-201ENST00000623191 700 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AC005609.4-201ENST00000625071 447 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AC019226.1-201ENST00000625666 515 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC099654.14-201ENST00000638599 341 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDT1Q9H211 Z83843.1-201ENST00000604070 3685 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.65□□□□□ -1.83
CDT1Q9H211 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDT1Q9H211 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDT1Q9H211 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDT1Q9H211 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDT1Q9H211 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.64□□□□□ -1.83
CDT1Q9H211 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDT1Q9H211 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
CDT1Q9H211 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDT1Q9H211 Y_RNA.296-201ENST00000364930 108 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 MIR19A-201ENST00000384878 82 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 CIR1P3-201ENST00000405137 479 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.64□□□□□ -1.83
CDT1Q9H211 BEND7P1-201ENST00000422058 457 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.64□□□□□ -1.83
CDT1Q9H211 AC019097.1-201ENST00000424783 735 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AL158071.1-201ENST00000430315 461 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC000111.3-201ENST00000433478 193 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC104850.1-201ENST00000435940 476 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 SNRPEP8-201ENST00000442866 260 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC008264.1-201ENST00000447612 367 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.64□□□□□ -1.83
CDT1Q9H211 BX510359.1-201ENST00000456973 237 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.64□□□□□ -1.83
CDT1Q9H211 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.64□□□□□ -1.83
CDT1Q9H211 APOOP4-201ENST00000513530 597 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.64□□□□□ -1.83
CDT1Q9H211 ADI1P3-201ENST00000549509 470 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 OR4T1P-201ENST00000554933 911 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 MIR3146-201ENST00000580367 79 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.64□□□□□ -1.83
CDT1Q9H211 TUG1_1.1-201ENST00000610654 145 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
CDT1Q9H211 AL359880.1-201ENST00000621879 266 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 DUXAP9-208ENST00000622815 614 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 AL138713.1-201ENST00000624026 2130 ntBASIC3.64□□□□□ -1.83
CDT1Q9H211 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 RNU5E-1-201ENST00000362477 120 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 RNU6-1155P-201ENST00000363554 107 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 RNY4P14-201ENST00000363656 96 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 SNORA51.2-201ENST00000364595 132 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 RNU6-282P-201ENST00000365357 103 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CDT1Q9H211 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 Y_RNA.453-201ENST00000384223 109 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 MIR634-201ENST00000385208 97 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 HMGN1P24-201ENST00000412282 298 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AC138393.2-201ENST00000414742 246 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 TOMM22P1-201ENST00000418578 312 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL137014.1-201ENST00000420490 1226 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDT1Q9H211 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.63□□□□□ -1.83
CDT1Q9H211 RPL31P35-201ENST00000431058 377 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 ARPC3P1-201ENST00000437218 533 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 MTND1P9-201ENST00000453775 944 ntBASIC3.63□□□□□ -1.83
CDT1Q9H211 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.63□□□□□ -1.83
CDT1Q9H211 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms