Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 OR1M4P-201ENST00000589199 287 ntBASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 AL160394.1-201ENST00000624765 724 ntBASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 AC099063.3-201ENST00000642066 185 ntBASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.12□□□□□ -2.07
SLIRPQ9GZT3 AC069528.2-201ENST00000624849 1991 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AL139276.1-201ENST00000311910 1001 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 RNU6-777P-201ENST00000364265 104 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 RNU6-432P-201ENST00000384196 109 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AL139132.1-201ENST00000431587 344 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 DPPA3P1-201ENST00000448050 469 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 snoU109.3-201ENST00000459477 145 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 RPL36AP51-201ENST00000487216 318 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC108729.1-201ENST00000487812 947 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC023538.1-201ENST00000534576 736 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC023813.2-201ENST00000564321 469 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC009163.5-201ENST00000575421 637 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 UBE2L4-201ENST00000587688 464 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC002545.1-201ENST00000592511 181 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 ELOCP35-201ENST00000604289 336 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AL158050.2-201ENST00000605336 568 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AL158801.5-201ENST00000623123 465 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 AC034229.5-201ENST00000624258 185 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 CCT4P2-201ENST00000233836 1548 ntBASIC2.11□□□□□ -2.07
SLIRPQ9GZT3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 RNU6-461P-201ENST00000364195 107 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MIR449B-201ENST00000384995 97 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MIR122-201ENST00000385044 85 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MIR888-201ENST00000401186 77 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 CCNG1P1-201ENST00000406783 885 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 SNORA11B-201ENST00000408175 129 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AL591503.2-201ENST00000442314 1005 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MTCO1P27-201ENST00000448269 226 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC005410.1-202ENST00000460347 485 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC079600.2-201ENST00000550076 130 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AL355877.2-201ENST00000603670 358 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC008498.1-201ENST00000613012 531 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC140725.3-201ENST00000616193 880 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 U6.105-201ENST00000637379 88 ntBASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SLIRPQ9GZT3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC135776.4-201ENST00000624300 1904 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 SNORD62.1-201ENST00000362541 86 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 RN7SKP226-201ENST00000364912 300 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 MIR183-201ENST00000384958 110 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms