Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC008837.2-201ENST00000513076 418 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 OR10V3P-201ENST00000525712 725 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC026464.5-201ENST00000562497 722 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC068313.1-201ENST00000604028 1008 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 HSPE1P7-201ENST00000604681 321 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AL390208.1-201ENST00000605885 644 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 PISRT1-201ENST00000626175 531 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 LINC02211-204ENST00000642024 1070 ntBASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
RPAP1Q9BWH6 ZNF72P-201ENST00000425869 1908 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 RNU6-28P-201ENST00000362378 107 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 SNORD114-1-201ENST00000362705 72 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 Y_RNA.472-201ENST00000384322 102 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AL590084.1-201ENST00000407885 387 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 TPMTP2-201ENST00000414372 726 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AL031183.1-201ENST00000457667 207 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC109464.2-201ENST00000510242 943 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC022483.1-201ENST00000514020 567 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC125611.2-201ENST00000551907 647 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC105137.2-201ENST00000569073 466 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 MIR3921-201ENST00000577308 85 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC090615.1-201ENST00000577519 154 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC105224.1-201ENST00000587055 421 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AF129408.1-201ENST00000608767 431 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 DUXAP10-204ENST00000612052 616 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 PART1_2.1-201ENST00000612397 250 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 AC008568.2-201ENST00000623862 2313 ntBASIC2.79□□□□□ -1.96
RPAP1Q9BWH6 Z82195.2-201ENST00000612348 18351 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RNU5E-10P-201ENST00000363506 118 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 CD24P4-201ENST00000382840 243 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RNA5SP252-201ENST00000391131 119 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AF274854.1-201ENST00000413236 615 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AL139421.1-201ENST00000423010 169 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 THAP5P1-201ENST00000439089 262 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RPL26P6-201ENST00000440913 438 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RPL30P9-201ENST00000465586 330 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RPL21P99-201ENST00000480369 423 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC006499.2-201ENST00000513470 337 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC093677.1-201ENST00000514414 678 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 CASP1P1-201ENST00000526345 212 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC087241.2-201ENST00000535801 324 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 BNIP3P26-201ENST00000600827 554 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC021749.1-201ENST00000604322 607 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AC091046.2-201ENST00000620775 665 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 AP003122.6-201ENST00000623831 495 ntBASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPAP1Q9BWH6 RNU6-1197P-201ENST00000391183 107 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 RPS3AP24-201ENST00000407896 734 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 TIMM9P2-201ENST00000419324 266 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 RPL23AP76-201ENST00000441860 458 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL358794.1-201ENST00000445689 381 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 RPL9P6-201ENST00000492764 598 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 RPL23AP49-201ENST00000492925 468 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 RPL37P25-201ENST00000507308 276 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 SNORA31.11-201ENST00000516528 139 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 SNRPGP18-201ENST00000553000 214 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 DNAJC8P1-201ENST00000554535 372 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 AC011260.1-201ENST00000578420 472 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP1Q9BWH6 BNIP3P27-201ENST00000599991 412 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms