Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AF131216.2-201ENST00000512316 564 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MTND3P5-201ENST00000512798 333 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 HMGB1P41-201ENST00000520234 440 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC060771.1-201ENST00000582031 164 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MIR548AB-201ENST00000584917 84 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC119751.7-201ENST00000600494 245 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC112191.3-201ENST00000604371 277 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MIR6748-201ENST00000610433 71 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL136295.6-201ENST00000610486 658 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL162274.2-201ENST00000614406 332 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC092140.2-201ENST00000618027 521 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MIR6130-201ENST00000619419 109 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC009268.2-201ENST00000621925 457 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 AL603839.4-201ENST00000624658 1005 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 MTCO1P9-201ENST00000505577 1534 ntBASIC2.88□□□□□ -1.95
CCDC28BQ9BUN5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.46-201ENST00000362695 102 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-1078P-201ENST00000364522 103 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 SNORA14A-201ENST00000364773 135 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.436-201ENST00000384097 102 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 MIR490-201ENST00000384865 128 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 HMGN1P14-201ENST00000412459 517 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 RPL22P17-201ENST00000438729 315 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AP000936.2-201ENST00000447151 681 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 snoU13.24-201ENST00000458998 104 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 SNORD42A-201ENST00000459584 64 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 SNORA31.20-201ENST00000517111 133 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AP002963.1-201ENST00000530590 184 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC011611.1-201ENST00000552179 197 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC040904.1-201ENST00000590850 223 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 BNIP3P8-201ENST00000597863 560 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC119501.1-201ENST00000603646 475 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 OR10AB1P-201ENST00000609613 938 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC009509.4-201ENST00000619202 509 ntBASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC28BQ9BUN5 Z82195.2-201ENST00000612348 18351 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.194-201ENST00000363985 102 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-114P-201ENST00000384704 105 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 RNU4-47P-201ENST00000410876 114 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 ATG3P1-201ENST00000419507 911 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 MTCO2P34-201ENST00000421994 607 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC018644.1-201ENST00000429934 551 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 RPL23AP58-201ENST00000440453 469 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 MTCO1P19-201ENST00000443487 500 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 USP9YP29-201ENST00000445112 563 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 PDSS1P2-201ENST00000449397 678 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 snoU109.1-201ENST00000459339 135 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC008155.2-201ENST00000464337 397 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 ARL2BPP4-201ENST00000506854 471 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC022483.1-201ENST00000514020 567 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AP002748.2-201ENST00000528671 348 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 ZNF519P3-201ENST00000557158 1032 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 NCAPGP2-201ENST00000557911 754 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC087481.2-201ENST00000565492 330 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms