Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.33□□□□□ -2.04
COL21A1Q96P44 PART1_2.1-201ENST00000612397 250 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 AC011890.2-201ENST00000613393 294 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 MIR6817-201ENST00000615588 66 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 AC109809.1-201ENST00000619665 545 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 AC008443.7-201ENST00000622195 246 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.33□□□□□ -2.04
COL21A1Q96P44 AP003399.1-201ENST00000637534 361 ntBASIC2.33□□□□□ -2.04
COL21A1Q96P44 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL21A1Q96P44 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL21A1Q96P44 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL21A1Q96P44 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 PABPC1P9-201ENST00000426076 1612 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC092447.10-201ENST00000620607 1652 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL21A1Q96P44 RNU6-223P-201ENST00000362830 107 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RNU6-97P-201ENST00000363387 104 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RNA5SP68-201ENST00000363885 119 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RNU6-637P-201ENST00000384050 107 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 ANAPC10P1-201ENST00000395991 556 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC008850.1-201ENST00000427546 362 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 SNRPEP7-201ENST00000438350 220 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AL714022.1-201ENST00000439897 151 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 Z82210.1-201ENST00000440037 231 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 PIGFP3-201ENST00000441918 722 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC116337.2-201ENST00000477662 156 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RN7SKP24-201ENST00000515888 284 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 DEFB131D-201ENST00000526803 184 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL21A1Q96P44 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 MTND3P13-201ENST00000574391 343 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC008739.2-201ENST00000597006 317 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AL133445.2-201ENST00000611191 527 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AL121895.2-201ENST00000619558 447 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC106858.1-201ENST00000637497 429 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC010149.2-201ENST00000637608 315 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC011477.1-204ENST00000623416 1325 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL21A1Q96P44 DDX10P1-201ENST00000448545 1933 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AL022578.1-201ENST00000439330 1433 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
COL21A1Q96P44 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL21A1Q96P44 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL21A1Q96P44 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL21A1Q96P44 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNU6-952P-201ENST00000391164 108 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC092047.1-201ENST00000424997 240 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC098826.1-201ENST00000433943 471 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RPL35AP22-201ENST00000436855 335 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 CBWD4P-201ENST00000445695 655 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AL513124.1-201ENST00000450410 614 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 USP9YP10-201ENST00000454868 628 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RPS20P20-201ENST00000460498 340 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RPS20P22-201ENST00000473700 357 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC104982.1-201ENST00000478775 574 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC021382.1-201ENST00000483523 359 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC109445.1-201ENST00000512356 383 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC112206.4-201ENST00000515142 405 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNU4-29P-201ENST00000515943 174 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNU6-1256P-201ENST00000516539 103 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AP002748.2-201ENST00000528671 348 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 TRAV28-201ENST00000557548 323 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC005498.1-201ENST00000592125 465 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 AL138960.2-201ENST00000625145 535 ntBASIC2.31□□□□□ -2.04
COL21A1Q96P44 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
COL21A1Q96P44 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL21A1Q96P44 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 Y_RNA.311-201ENST00000365068 96 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 MIR767-201ENST00000390228 109 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNU6-754P-201ENST00000391166 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms