Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC093801.2-201ENST00000503966 1050 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.97□□□□□ -2.25
SPG11Q96JI7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 NOP56P3-201ENST00000549457 385 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.97□□□□□ -2.25
SPG11Q96JI7 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 AC138473.1-201ENST00000605717 526 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 AC005156.1-201ENST00000613371 573 ntBASIC0.97□□□□□ -2.25
SPG11Q96JI7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SPG11Q96JI7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SPG11Q96JI7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 RPL21P93-201ENST00000480465 489 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC233702.1-201ENST00000482905 502 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC093591.1-201ENST00000491435 481 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC090897.2-201ENST00000581715 130 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 VN1R107P-201ENST00000601784 209 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 DEFB108F-201ENST00000344638 222 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 RNU2-37P-201ENST00000410695 177 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 RPL7P34-201ENST00000433316 712 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AL512661.1-201ENST00000434586 1253 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 SNRPGP3-201ENST00000469405 227 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC093852.1-201ENST00000503587 266 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AL138976.2-201ENST00000563989 694 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 AC018754.1-201ENST00000607486 925 ntBASIC0.96□□□□□ -2.26
SPG11Q96JI7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
SPG11Q96JI7 RNU1-109P-201ENST00000383960 147 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 PSMA2P3-201ENST00000429685 675 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 AC092902.1-201ENST00000486999 259 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 AC012170.1-201ENST00000495139 359 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 MIR4636-201ENST00000582271 80 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 MIR936-201ENST00000401264 98 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 MORF4L1P7-201ENST00000426038 703 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 ARPC3P2-201ENST00000457786 533 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 AC092754.2-201ENST00000463506 460 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.95□□□□□ -2.26
SPG11Q96JI7 MIR7974-201ENST00000615835 79 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 AC090517.3-201ENST00000625170 141 ntBASIC0.95□□□□□ -2.26
SPG11Q96JI7 AL359851.1-201ENST00000569460 4997 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNU1-23P-201ENST00000363361 144 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC099548.1-201ENST00000421443 426 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 MIR6840-201ENST00000611937 71 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC116618.1-201ENST00000634617 774 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 SNORD56.5-201ENST00000364281 72 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNU6-17P-201ENST00000384245 107 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNU6-18P-201ENST00000384527 107 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNU6-178P-201ENST00000384631 104 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNA5SP233-201ENST00000459153 113 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 RNU6-84P-201ENST00000607737 102 ntBASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.94□□□□□ -2.26
SPG11Q96JI7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 RPS23P3-201ENST00000470993 430 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 AL133393.1-201ENST00000603277 287 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 RNU6-173P-201ENST00000364215 104 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 RNY3-201ENST00000365484 102 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 RNA5SP492-201ENST00000411330 114 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 MTCO1P43-201ENST00000431831 488 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 DPPA3P1-201ENST00000448050 469 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.93□□□□□ -2.26
SPG11Q96JI7 SETP2-201ENST00000553886 926 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
SPG11Q96JI7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.92□□□□□ -2.26
SPG11Q96JI7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
SPG11Q96JI7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
SPG11Q96JI7 RNU6-203P-201ENST00000384038 104 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 MIR591-201ENST00000385290 95 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 MIR1912-201ENST00000410389 80 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 MIR1468-201ENST00000410600 86 ntBASIC0.92□□□□□ -2.26
SPG11Q96JI7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.92□□□□□ -2.26
SPG11Q96JI7 SNORD116-26-201ENST00000516006 96 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms