Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC022336.2-201ENST00000568966 2538 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 RNA5SP479-201ENST00000364858 117 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 MT-TH-201ENST00000387441 69 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL359634.1-202ENST00000404721 284 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 RPL7P8-201ENST00000411964 730 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 OR2AS1P-201ENST00000427827 319 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC091390.1-201ENST00000433904 331 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC098826.1-201ENST00000433943 471 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL512844.2-201ENST00000433990 593 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 TIMM9P1-201ENST00000436122 256 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 Z82210.1-201ENST00000440037 231 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 BNIP3P2-201ENST00000441221 577 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 COX6CP2-201ENST00000444980 225 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 BMI1P1-201ENST00000445879 941 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 Z99127.3-201ENST00000448158 395 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 EPS15P1-201ENST00000448836 336 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC115115.1-201ENST00000449927 248 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 ACTR3P3-201ENST00000480448 893 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 RNU6-64P-201ENST00000517119 105 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC123904.3-201ENST00000547218 814 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 HIGD1AP1-201ENST00000550979 275 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 ZNF519P3-201ENST00000557158 1032 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 TRAV28-201ENST00000557548 323 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 HMGB1P6-201ENST00000569046 646 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 MIR3160-1-201ENST00000577972 85 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AF131215.7-201ENST00000602443 707 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC104073.3-201ENST00000610942 955 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC245517.5-201ENST00000611529 162 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 AL121772.2-201ENST00000614331 297 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 SNHG22-203ENST00000617833 660 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 MIR6810-201ENST00000622701 70 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.92□□□□□ -1.94
RFT1Q96AA3 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 ZNF285B-201ENST00000561698 1767 ntBASIC2.92□□□□□ -1.94
RFT1Q96AA3 MTND4P4-201ENST00000439033 1366 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC233263.6-201ENST00000631132 1963 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFT1Q96AA3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 RNA5SP124-201ENST00000362739 110 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 RNU4-21P-201ENST00000362802 126 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 Y_RNA.553-201ENST00000384670 102 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 RNA5SP252-201ENST00000391131 119 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 RNU2-33P-201ENST00000410344 192 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 RPL7P10-201ENST00000417407 739 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFT1Q96AA3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFT1Q96AA3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFT1Q96AA3 CST9LP2-201ENST00000437612 320 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC020550.1-201ENST00000447385 163 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC009961.3-201ENST00000449832 765 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC010099.1-201ENST00000455434 375 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC010631.1-201ENST00000474150 156 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 LARP1BP2-201ENST00000486594 519 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC112204.1-201ENST00000502591 103 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 MTND4LP18-201ENST00000526864 291 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AP002748.2-201ENST00000528671 348 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AP000867.2-201ENST00000532468 320 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
RFT1Q96AA3 MIR5697-201ENST00000578045 78 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC068790.6-201ENST00000602558 258 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AL021997.1-201ENST00000605757 193 ntBASIC2.91□□□□□ -1.94
RFT1Q96AA3 AC108747.1-201ENST00000609508 535 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms