Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNU5A-8P-201ENST00000364102 114 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNY1P12-201ENST00000364251 105 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNY4P16-201ENST00000364768 94 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 MIR135A2-201ENST00000384854 100 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNA5SP424-201ENST00000390988 115 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNU6-882P-201ENST00000391025 103 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 MIR1277-201ENST00000408536 78 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 BEND7P1-201ENST00000422058 457 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC133104.1-201ENST00000429100 218 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AL451074.3-201ENST00000437709 472 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 FTH1P1-201ENST00000437933 532 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC004866.2-201ENST00000438285 481 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 NFU1P2-201ENST00000448700 469 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC006480.1-201ENST00000449887 378 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 C1DP4-201ENST00000455429 424 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC108059.3-201ENST00000456388 214 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 HMGB1P29-201ENST00000505659 499 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 RNU6-798P-201ENST00000516912 103 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 HMGN1P28-201ENST00000521340 364 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC118273.2-201ENST00000532092 465 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AK6P1-201ENST00000540219 478 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 ADI1P3-201ENST00000549509 470 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AL121579.1-201ENST00000555129 305 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC006254.3-201ENST00000603353 884 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC010591.1-201ENST00000603941 649 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC012468.1-201ENST00000604888 430 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 MIR6863-201ENST00000636112 90 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 MIR3688-2-201ENST00000636963 87 ntBASIC3.83□□□□□ -1.8
ATP2A3Q93084 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATP2A3Q93084 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
ATP2A3Q93084 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AL138713.1-201ENST00000624026 2130 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 MIR19A-201ENST00000384878 82 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 RNU6-278P-201ENST00000390945 109 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 RPL7P60-201ENST00000397636 735 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 CALM2P3-201ENST00000400429 449 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATP2A3Q93084 MTND3P17-201ENST00000416968 344 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC137499.1-201ENST00000427602 88 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC017083.1-201ENST00000428093 483 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 TIMM9P1-201ENST00000436122 256 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 SNRPEP8-201ENST00000442866 260 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 RPS3AP12-201ENST00000443616 753 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 RPL21P23-201ENST00000446654 460 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 TPT1P14-201ENST00000448018 505 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC010655.1-201ENST00000449336 292 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 CYCSP35-201ENST00000451978 304 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 MTND1P12-201ENST00000455231 147 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 MTCO2P29-201ENST00000465212 189 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 RPS27AP1-201ENST00000475545 471 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC098799.2-201ENST00000509466 868 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC074344.1-201ENST00000512823 224 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 OR5B10P-201ENST00000532869 642 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 MIR3922-201ENST00000585192 84 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC091135.1-201ENST00000585943 307 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.82□□□□□ -1.8
ATP2A3Q93084 AL161756.2-201ENST00000604597 246 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AL158211.4-201ENST00000606988 584 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC007038.2-201ENST00000608095 740 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 AC096577.2-201ENST00000611455 153 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 XIST_intron.1-201ENST00000619444 68 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 PLCE1P1-201ENST00000622094 305 ntBASIC3.82□□□□□ -1.8
ATP2A3Q93084 LRRC77P-213ENST00000637727 880 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms