Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 AC004865.1-201ENST00000442276 1003 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 AC124916.1-201ENST00000444020 547 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 AC097499.1-201ENST00000444277 208 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 AL034418.1-201ENST00000448675 860 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 RNU6-491P-201ENST00000516099 110 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 AC025016.1-201ENST00000616746 682 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RTL9Q8NET4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.92□□□□□ -2.1
RTL9Q8NET4 AL354685.2-201ENST00000448218 1447 ntBASIC1.92□□□□□ -2.1
RTL9Q8NET4 RNU6-891P-201ENST00000384280 111 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 MIR518E-201ENST00000385252 88 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 SSXP10-201ENST00000402595 565 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 RPS3AP9-201ENST00000417027 792 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC009474.2-201ENST00000451383 136 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 EIF4EP3-201ENST00000498782 656 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC118942.1-201ENST00000529674 1035 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC107214.2-201ENST00000608204 634 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC008669.1-201ENST00000565823 2178 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 AC027514.1-201ENST00000588561 1603 ntBASIC1.91□□□□□ -2.1
RTL9Q8NET4 AL023807.1-201ENST00000407932 359 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 AL357078.2-201ENST00000416486 427 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 TMEM167AP1-201ENST00000423409 219 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 NAP1L1P3-201ENST00000462291 880 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 KATNBL1P4-201ENST00000503545 918 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 SNORA31.18-201ENST00000517043 134 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 RNA5SP490-201ENST00000517141 136 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 C1DP5-201ENST00000525775 383 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 AC023824.2-201ENST00000566185 400 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 AL355812.1-201ENST00000603215 216 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 SNORD14A-201ENST00000606526 91 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 RMST_6.1-201ENST00000611980 203 ntBASIC1.9□□□□□ -2.11
RTL9Q8NET4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL9Q8NET4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RTL9Q8NET4 RNU6-707P-201ENST00000364647 95 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 RNU6-339P-201ENST00000384310 107 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 SNORA67.6-201ENST00000391093 99 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AL035405.1-201ENST00000400795 710 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 SDCBPP1-201ENST00000440192 890 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC005539.1-201ENST00000443768 1479 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 RPL31P41-201ENST00000477967 372 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC096751.1-202ENST00000502691 1067 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 MIR4421-201ENST00000578133 69 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 SUMO2P14-201ENST00000604488 293 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 HSPE1P7-201ENST00000604681 321 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC013468.1-201ENST00000608680 598 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 BX649567.1-201ENST00000642071 1134 ntBASIC1.89□□□□□ -2.11
RTL9Q8NET4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.89□□□□□ -2.11
RTL9Q8NET4 AC233981.2-201ENST00000611524 1614 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 RNU6-989P-201ENST00000362756 107 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 SNORA7.1-201ENST00000363750 139 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RTL9Q8NET4 RNU6-1226P-201ENST00000384317 107 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 RNA5SP354-201ENST00000391247 136 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 AL513475.1-201ENST00000406602 315 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.88□□□□□ -2.11
RTL9Q8NET4 PAICSP7-201ENST00000419829 962 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 ARF4P4-201ENST00000439608 520 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 SNRPGP9-201ENST00000456025 225 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.88□□□□□ -2.11
RTL9Q8NET4 RPS29P20-201ENST00000489592 171 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.88□□□□□ -2.11
RTL9Q8NET4 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.88□□□□□ -2.11
RTL9Q8NET4 AC022634.1-201ENST00000520765 532 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 AL161670.1-201ENST00000554348 137 ntBASIC1.88□□□□□ -2.11
RTL9Q8NET4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.88□□□□□ -2.11
RTL9Q8NET4 AC068944.2-201ENST00000610373 403 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms