Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC89Q8N998 RPS27AP10-201ENST00000496103 208 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC078899.3-201ENST00000599065 212 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 DUSP12P1-201ENST00000612874 516 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC009159.1-201ENST00000618386 642 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 AC104454.1-201ENST00000421341 1401 ntBASIC3.33□□□□□ -1.88
CCDC89Q8N998 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC89Q8N998 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC89Q8N998 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC89Q8N998 Y_RNA.97-201ENST00000363094 102 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RNU6-778P-201ENST00000363269 103 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RNU6-512P-201ENST00000364438 103 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 SET-203ENST00000372688 801 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RPS20P2-201ENST00000402520 389 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL513475.1-201ENST00000406602 315 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 BX323014.1-201ENST00000412876 237 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 HSFY4P-201ENST00000415994 1181 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 MTND2P9-201ENST00000422293 931 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC005300.1-201ENST00000428401 373 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC89Q8N998 MED14P1-201ENST00000430517 648 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC092427.1-202ENST00000430569 476 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL008629.1-201ENST00000438615 184 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RPL22P17-201ENST00000438729 315 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC122718.1-201ENST00000439448 744 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 FABP5P15-201ENST00000453566 214 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL590639.1-201ENST00000456484 337 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC89Q8N998 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RN7SKP40-201ENST00000517211 242 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 COX6CP5-201ENST00000527162 228 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 MTND1P24-201ENST00000552175 861 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 RPS3AP4-201ENST00000555161 764 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL355598.1-201ENST00000604169 202 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL161734.1-201ENST00000609720 557 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AC025594.3-201ENST00000613068 790 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 AL356863.1-201ENST00000623378 1080 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 FRG1KP-201ENST00000623592 341 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC89Q8N998 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 ELF2P3-201ENST00000445099 1506 ntBASIC3.32□□□□□ -1.88
CCDC89Q8N998 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC89Q8N998 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC89Q8N998 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC89Q8N998 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 RN7SKP226-201ENST00000364912 300 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 RNY3P13-201ENST00000365542 102 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC89Q8N998 RPL7P25-201ENST00000404151 721 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC006366.1-201ENST00000422002 759 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL353777.1-201ENST00000425552 326 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 SKA2P1-201ENST00000425592 390 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 RPL21P13-201ENST00000488305 481 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AP006587.4-201ENST00000526053 529 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC008751.2-201ENST00000597885 980 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 NRBF2P5-201ENST00000603087 788 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.6-201ENST00000603753 252 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.11-201ENST00000604059 253 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AC008162.1-201ENST00000604718 254 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.1-201ENST00000604752 252 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.5-201ENST00000605253 252 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.12-201ENST00000605291 253 ntBASIC3.31□□□□□ -1.88
CCDC89Q8N998 AL670379.8-201ENST00000605353 252 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms