Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX5Q8N196 RPL12P39-201ENST00000455456 496 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AC091153.1-201ENST00000466297 402 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 RPL39P38-201ENST00000467018 153 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 RN7SL244P-201ENST00000493405 297 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
SIX5Q8N196 FKBP1BP1-201ENST00000553366 325 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AL049839.1-201ENST00000556151 657 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 MIR3667-201ENST00000581025 74 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 MIR3128-201ENST00000581957 66 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AC009314.1-201ENST00000603871 304 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AL159153.1-201ENST00000619688 317 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AC130454.1-201ENST00000622948 401 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SIX5Q8N196 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX5Q8N196 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.34□□□□□ -1.55
SIX5Q8N196 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIX5Q8N196 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIX5Q8N196 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIX5Q8N196 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SIX5Q8N196 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.56
SIX5Q8N196 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.34□□□□□ -1.56
SIX5Q8N196 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX5Q8N196 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX5Q8N196 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SIX5Q8N196 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX5Q8N196 AC104964.3-201ENST00000606115 2860 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 MIR412-201ENST00000362142 91 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 Y_RNA.14-201ENST00000362415 103 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 RNU4-44P-201ENST00000363050 141 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 Y_RNA.376-201ENST00000365638 108 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC068538.1-201ENST00000376856 336 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIX5Q8N196 SNORA69.1-201ENST00000390904 137 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC092573.2-201ENST00000434546 243 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX5Q8N196 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 RPL34P20-201ENST00000442771 351 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.33□□□□□ -1.56
SIX5Q8N196 IGKV2D-23-201ENST00000518179 286 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX5Q8N196 AC122688.1-201ENST00000541494 223 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.33□□□□□ -1.56
SIX5Q8N196 AC007375.1-201ENST00000554513 578 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AMZ2P1-203ENST00000565833 850 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.33□□□□□ -1.56
SIX5Q8N196 AC090517.1-201ENST00000569307 266 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC091042.1-201ENST00000579213 173 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 AL158827.2-201ENST00000602494 330 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AL161798.1-201ENST00000604630 131 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 AL691447.3-201ENST00000635020 330 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 SCARNA15-201ENST00000607520 4325 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIX5Q8N196 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SIX5Q8N196 MAPK10-349ENST00000641767 3661 ntBASIC5.33□□□□□ -1.56
SIX5Q8N196 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SIX5Q8N196 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.32□□□□□ -1.56
SIX5Q8N196 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SIX5Q8N196 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIX5Q8N196 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-37P-201ENST00000362692 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 Y_RNA.60-201ENST00000362831 98 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-770P-201ENST00000363929 105 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-11P-201ENST00000364234 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-7-201ENST00000364784 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNA5SP235-201ENST00000365411 114 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-8-201ENST00000365467 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-25P-201ENST00000383873 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-1-201ENST00000383898 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-48P-201ENST00000384161 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-36P-201ENST00000384172 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-4P-201ENST00000384205 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-5P-201ENST00000384238 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-3P-201ENST00000384314 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-16P-201ENST00000384385 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-15P-201ENST00000384534 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-2-201ENST00000384627 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-29P-201ENST00000384637 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-9-201ENST00000384776 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-33P-201ENST00000384793 107 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.32□□□□□ -1.56
SIX5Q8N196 RPL18P10-201ENST00000425606 538 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 KRT8P51-201ENST00000438938 274 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RPS29P10-201ENST00000439197 166 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.32□□□□□ -1.56
SIX5Q8N196 COX6B1P5-201ENST00000509843 249 ntBASIC5.32□□□□□ -1.56
SIX5Q8N196 RNU6-1023P-201ENST00000516137 106 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms