Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 PTENP1-201ENST00000447117 1215 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AL009048.1-201ENST00000450437 298 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC073901.1-201ENST00000462471 408 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC116337.2-201ENST00000477662 156 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC119751.4-201ENST00000507498 357 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC008716.1-201ENST00000511084 513 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC022662.1-201ENST00000580252 331 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC106052.1-201ENST00000608029 497 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC104237.2-201ENST00000612456 443 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 UCA1.1-201ENST00000620952 75 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC009268.2-201ENST00000621925 457 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC019226.1-201ENST00000625666 515 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC099063.3-201ENST00000642066 185 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 DDX10P1-201ENST00000448545 1933 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 SNORA9-201ENST00000384215 133 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-636P-201ENST00000384598 107 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-925P-201ENST00000384629 104 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RPS4XP7-201ENST00000406274 780 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AL513475.1-201ENST00000406602 315 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 BNIP3P2-201ENST00000441221 577 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 NANOGNBP1-201ENST00000448444 480 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RSL24D1P3-201ENST00000449255 495 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 PAXBP1P1-201ENST00000449315 447 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 MTND1P9-201ENST00000453775 944 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 USP9YP25-201ENST00000457708 443 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AC092798.1-201ENST00000458542 409 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RPS20P20-201ENST00000460498 340 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RPL7P18-201ENST00000478965 734 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AC034159.1-201ENST00000513885 583 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 RPL23AP84-201ENST00000571193 464 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 BNIP3P22-201ENST00000593399 556 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AL139344.1-201ENST00000605228 195 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AL133445.2-201ENST00000611191 527 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.49□□□□□ -2.01
NUDCD3Q8IVD9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-461P-201ENST00000364195 107 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-906P-201ENST00000384700 70 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 TAS2R15P-201ENST00000390674 928 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-754P-201ENST00000391166 107 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AL109755.1-201ENST00000401791 649 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC007919.1-201ENST00000429380 217 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 HSFY7P-201ENST00000432672 318 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC098826.1-201ENST00000433943 471 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 HSFY8P-201ENST00000437934 318 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AL135938.1-201ENST00000443141 297 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 MTCO1P27-201ENST00000448269 226 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 HSFY5P-201ENST00000453726 309 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 snoU13.22-201ENST00000459428 104 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 MTND4LP3-201ENST00000468320 276 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 RPS15AP34-201ENST00000487776 387 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC022447.3-201ENST00000506865 495 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC093281.2-201ENST00000510153 597 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 NRON-201ENST00000517270 370 ntBASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUDCD3Q8IVD9 TRAV28-201ENST00000557548 323 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms